Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
KRT9P35527 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT9P35527 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT9P35527 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
KRT9P35527 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT9P35527 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
KRT9P35527 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 PIN1P1-201ENST00000412108 996 ntBASIC16.26■□□□□ 0.19
KRT9P35527 SOCS2P1-201ENST00000417727 557 ntBASIC16.26■□□□□ 0.19
KRT9P35527 AC098850.1-201ENST00000419919 790 ntBASIC16.26■□□□□ 0.19
KRT9P35527 NUS1P3-201ENST00000423502 862 ntBASIC16.26■□□□□ 0.19
KRT9P35527 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.26■□□□□ 0.19
KRT9P35527 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.26■□□□□ 0.19
KRT9P35527 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT9P35527 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.26■□□□□ 0.19
KRT9P35527 AC133539.2-201ENST00000604757 467 ntBASIC16.26■□□□□ 0.19
KRT9P35527 TMEM261P1-201ENST00000604899 340 ntBASIC16.26■□□□□ 0.19
KRT9P35527 AC007431.3-201ENST00000623221 587 ntBASIC16.26■□□□□ 0.19
KRT9P35527 BX539320.1-201ENST00000623759 877 ntBASIC16.26■□□□□ 0.19
KRT9P35527 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT9P35527 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
KRT9P35527 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT9P35527 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
KRT9P35527 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.26■□□□□ 0.19
KRT9P35527 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT9P35527 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT9P35527 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT9P35527 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KRT9P35527 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT9P35527 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.25■□□□□ 0.19
KRT9P35527 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
KRT9P35527 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.25■□□□□ 0.19
KRT9P35527 TERF1P3-201ENST00000505638 1227 ntBASIC16.25■□□□□ 0.19
KRT9P35527 API5-211ENST00000534695 560 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT9P35527 AL359711.2-201ENST00000563105 872 ntBASIC16.25■□□□□ 0.19
KRT9P35527 DUX4L47-201ENST00000566374 394 ntBASIC16.25■□□□□ 0.19
KRT9P35527 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
KRT9P35527 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.25■□□□□ 0.19
KRT9P35527 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT9P35527 PRSS30P-206ENST00000641773 873 ntBASIC16.25■□□□□ 0.19
KRT9P35527 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
KRT9P35527 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT9P35527 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT9P35527 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
KRT9P35527 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
KRT9P35527 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KRT9P35527 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
KRT9P35527 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
KRT9P35527 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KRT9P35527 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
KRT9P35527 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT9P35527 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT9P35527 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT9P35527 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT9P35527 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT9P35527 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT9P35527 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT9P35527 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
KRT9P35527 CICP16-201ENST00000502609 2813 ntBASIC16.24■□□□□ 0.19
KRT9P35527 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT9P35527 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT9P35527 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT9P35527 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT9P35527 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT9P35527 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT9P35527 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT9P35527 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT9P35527 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT9P35527 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT9P35527 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
KRT9P35527 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
KRT9P35527 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms