Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 RPL37AP1-201ENST00000412502 279 ntBASIC16.91■□□□□ 0.3
CLCN1P35523 AL080243.2-201ENST00000418783 582 ntBASIC16.91■□□□□ 0.3
CLCN1P35523 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.91■□□□□ 0.3
CLCN1P35523 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.91■□□□□ 0.3
CLCN1P35523 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.91■□□□□ 0.3
CLCN1P35523 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.91■□□□□ 0.3
CLCN1P35523 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CLCN1P35523 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.91■□□□□ 0.3
CLCN1P35523 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.91■□□□□ 0.3
CLCN1P35523 AP001160.2-201ENST00000596071 487 ntBASIC16.91■□□□□ 0.3
CLCN1P35523 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CLCN1P35523 AL589739.1-201ENST00000607720 493 ntBASIC16.91■□□□□ 0.3
CLCN1P35523 Z92544.3-201ENST00000624747 417 ntBASIC16.91■□□□□ 0.3
CLCN1P35523 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLCN1P35523 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLCN1P35523 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.9■□□□□ 0.3
CLCN1P35523 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLCN1P35523 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 AC012617.1-204ENST00000586340 2305 ntBASIC16.9■□□□□ 0.3
CLCN1P35523 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.9■□□□□ 0.3
CLCN1P35523 AL354702.1-201ENST00000442006 1960 ntBASIC16.9■□□□□ 0.3
CLCN1P35523 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.9■□□□□ 0.3
CLCN1P35523 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CLCN1P35523 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CLCN1P35523 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.9■□□□□ 0.3
CLCN1P35523 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.9■□□□□ 0.3
CLCN1P35523 TARDBPP1-201ENST00000442013 1203 ntBASIC16.9■□□□□ 0.3
CLCN1P35523 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.9■□□□□ 0.3
CLCN1P35523 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLCN1P35523 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.9■□□□□ 0.3
CLCN1P35523 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.9■□□□□ 0.3
CLCN1P35523 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.9■□□□□ 0.3
CLCN1P35523 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.9■□□□□ 0.3
CLCN1P35523 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCN1P35523 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLCN1P35523 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLCN1P35523 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CLCN1P35523 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.89■□□□□ 0.3
CLCN1P35523 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLCN1P35523 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCN1P35523 AC015819.3-201ENST00000624305 2674 ntBASIC16.89■□□□□ 0.29
CLCN1P35523 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLCN1P35523 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 AC020910.6-201ENST00000623084 1459 ntBASIC16.89■□□□□ 0.29
CLCN1P35523 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLCN1P35523 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.89■□□□□ 0.29
CLCN1P35523 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.89■□□□□ 0.29
CLCN1P35523 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.89■□□□□ 0.29
CLCN1P35523 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCN1P35523 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.89■□□□□ 0.29
CLCN1P35523 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms