Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AL590640.2-201ENST00000457038 527 ntBASIC15.64■□□□□ 0.09
RFC1P35251 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 AC022447.6-201ENST00000515522 438 ntBASIC15.64■□□□□ 0.09
RFC1P35251 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.64■□□□□ 0.09
RFC1P35251 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.64■□□□□ 0.09
RFC1P35251 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.64■□□□□ 0.09
RFC1P35251 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 AC244669.2-201ENST00000612320 853 ntBASIC15.64■□□□□ 0.09
RFC1P35251 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 AC092135.3-201ENST00000624151 1846 ntBASIC15.64■□□□□ 0.09
RFC1P35251 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 AL136172.1-201ENST00000598590 1394 ntBASIC15.63■□□□□ 0.09
RFC1P35251 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RFC1P35251 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
RFC1P35251 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
RFC1P35251 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.63■□□□□ 0.09
RFC1P35251 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 GCOM2-201ENST00000509133 1104 ntBASIC15.63■□□□□ 0.09
RFC1P35251 RNA5SP486-201ENST00000515961 83 ntBASIC15.63■□□□□ 0.09
RFC1P35251 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.63■□□□□ 0.09
RFC1P35251 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 AC005225.4-201ENST00000557330 545 ntBASIC15.63■□□□□ 0.09
RFC1P35251 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.63■□□□□ 0.09
RFC1P35251 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.63■□□□□ 0.09
RFC1P35251 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.63■□□□□ 0.09
RFC1P35251 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.63■□□□□ 0.09
RFC1P35251 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RFC1P35251 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RFC1P35251 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 AC009093.2-202ENST00000620513 2079 ntBASIC15.63■□□□□ 0.09
RFC1P35251 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.63■□□□□ 0.09
RFC1P35251 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC1P35251 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC1P35251 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC1P35251 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC1P35251 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RFC1P35251 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.62■□□□□ 0.09
RFC1P35251 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RFC1P35251 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms