Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC005252.2-201ENST00000624630 1141 ntBASIC15.67■□□□□ 0.1
CHRNA3P32297 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA3P32297 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CHRNA3P32297 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA3P32297 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHRNA3P32297 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA3P32297 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA3P32297 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA3P32297 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CHRNA3P32297 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA3P32297 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA3P32297 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CHRNA3P32297 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 AL645937.2-201ENST00000396808 931 ntBASIC15.66■□□□□ 0.1
CHRNA3P32297 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.66■□□□□ 0.1
CHRNA3P32297 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.66■□□□□ 0.1
CHRNA3P32297 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA3P32297 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.66■□□□□ 0.1
CHRNA3P32297 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.66■□□□□ 0.1
CHRNA3P32297 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.66■□□□□ 0.1
CHRNA3P32297 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA3P32297 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.66■□□□□ 0.1
CHRNA3P32297 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA3P32297 AL512343.1-201ENST00000605837 169 ntBASIC15.66■□□□□ 0.1
CHRNA3P32297 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA3P32297 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA3P32297 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA3P32297 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA3P32297 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA3P32297 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA3P32297 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA3P32297 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA3P32297 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA3P32297 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA3P32297 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA3P32297 AL158070.2-201ENST00000623713 1621 ntBASIC15.65■□□□□ 0.1
CHRNA3P32297 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CHRNA3P32297 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 KRT43P-201ENST00000434019 910 ntBASIC15.65■□□□□ 0.1
CHRNA3P32297 AC093433.1-201ENST00000458048 571 ntBASIC15.65■□□□□ 0.1
CHRNA3P32297 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.65■□□□□ 0.1
CHRNA3P32297 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 AP001582.1-201ENST00000525856 295 ntBASIC15.65■□□□□ 0.1
CHRNA3P32297 AC068587.3-201ENST00000526613 355 ntBASIC15.65■□□□□ 0.1
CHRNA3P32297 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CHRNA3P32297 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.65■□□□□ 0.1
CHRNA3P32297 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA3P32297 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNA3P32297 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms