Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CHMP24386 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CHMP24386 AL645937.2-201ENST00000396808 931 ntBASIC13.92□□□□□ -0.18
CHMP24386 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.92□□□□□ -0.18
CHMP24386 ATP5G2P4-201ENST00000442175 420 ntBASIC13.92□□□□□ -0.18
CHMP24386 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.92□□□□□ -0.18
CHMP24386 TPT1P11-201ENST00000458482 498 ntBASIC13.92□□□□□ -0.18
CHMP24386 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.92□□□□□ -0.18
CHMP24386 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CHMP24386 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.92□□□□□ -0.18
CHMP24386 RAB43P1-201ENST00000561790 589 ntBASIC13.92□□□□□ -0.18
CHMP24386 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.92□□□□□ -0.18
CHMP24386 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.92□□□□□ -0.18
CHMP24386 AC008735.3-201ENST00000596646 500 ntBASIC13.92□□□□□ -0.18
CHMP24386 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.92□□□□□ -0.18
CHMP24386 BX539320.1-201ENST00000623759 877 ntBASIC13.92□□□□□ -0.18
CHMP24386 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.92□□□□□ -0.18
CHMP24386 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CHMP24386 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 AC126335.2-201ENST00000623362 4637 ntBASIC13.92□□□□□ -0.18
CHMP24386 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CHMP24386 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CHMP24386 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.91□□□□□ -0.18
CHMP24386 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CHMP24386 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 AC011474.4-201ENST00000623523 2076 ntBASIC13.91□□□□□ -0.18
CHMP24386 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CHMP24386 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.91□□□□□ -0.18
CHMP24386 BAATP1-201ENST00000412284 1225 ntBASIC13.91□□□□□ -0.18
CHMP24386 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.91□□□□□ -0.18
CHMP24386 AP001582.1-201ENST00000525856 295 ntBASIC13.91□□□□□ -0.18
CHMP24386 AC068587.3-201ENST00000526613 355 ntBASIC13.91□□□□□ -0.18
CHMP24386 KRT17P8-201ENST00000540749 863 ntBASIC13.91□□□□□ -0.18
CHMP24386 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 BTNL10-201ENST00000595971 695 ntBASIC13.91□□□□□ -0.18
CHMP24386 AC233724.13-201ENST00000598383 410 ntBASIC13.91□□□□□ -0.18
CHMP24386 AC017083.2-201ENST00000608069 979 ntBASIC13.91□□□□□ -0.18
CHMP24386 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 AP005019.2-201ENST00000615104 511 ntBASIC13.91□□□□□ -0.18
CHMP24386 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.91□□□□□ -0.18
CHMP24386 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.91□□□□□ -0.18
CHMP24386 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.91□□□□□ -0.18
CHMP24386 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.91□□□□□ -0.18
CHMP24386 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CHMP24386 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.91□□□□□ -0.18
CHMP24386 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHMP24386 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms