Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.99□□□□□ -0.01
VCLP18206 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.99□□□□□ -0.01
VCLP18206 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VCLP18206 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VCLP18206 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.99□□□□□ -0.01
VCLP18206 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VCLP18206 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VCLP18206 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VCLP18206 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.99□□□□□ -0.01
VCLP18206 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VCLP18206 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.98□□□□□ -0.01
VCLP18206 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.98□□□□□ -0.01
VCLP18206 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
VCLP18206 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.98□□□□□ -0.01
VCLP18206 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 MSTO2P-201ENST00000314835 1709 ntBASIC14.98□□□□□ -0.01
VCLP18206 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.98□□□□□ -0.01
VCLP18206 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VCLP18206 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VCLP18206 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.98□□□□□ -0.01
VCLP18206 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VCLP18206 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.98□□□□□ -0.01
VCLP18206 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.98□□□□□ -0.01
VCLP18206 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.98□□□□□ -0.01
VCLP18206 AC106760.1-201ENST00000508690 800 ntBASIC14.98□□□□□ -0.01
VCLP18206 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.98□□□□□ -0.01
VCLP18206 HILS1-202ENST00000545329 423 ntBASIC14.98□□□□□ -0.01
VCLP18206 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.98□□□□□ -0.01
VCLP18206 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VCLP18206 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.98□□□□□ -0.01
VCLP18206 AL512343.1-201ENST00000605837 169 ntBASIC14.98□□□□□ -0.01
VCLP18206 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
VCLP18206 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.98□□□□□ -0.01
VCLP18206 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.98□□□□□ -0.01
VCLP18206 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
VCLP18206 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.98□□□□□ -0.01
VCLP18206 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VCLP18206 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.98□□□□□ -0.01
VCLP18206 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VCLP18206 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.97□□□□□ -0.01
VCLP18206 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.97□□□□□ -0.01
VCLP18206 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.97□□□□□ -0.01
VCLP18206 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.97□□□□□ -0.01
VCLP18206 AC092933.1-201ENST00000393644 945 ntBASIC14.97□□□□□ -0.01
VCLP18206 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.97□□□□□ -0.01
VCLP18206 ARSEP1-201ENST00000420443 635 ntBASIC14.97□□□□□ -0.01
VCLP18206 AC007551.1-201ENST00000457394 519 ntBASIC14.97□□□□□ -0.01
VCLP18206 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VCLP18206 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.97□□□□□ -0.01
VCLP18206 AL359881.2-201ENST00000602973 570 ntBASIC14.97□□□□□ -0.01
VCLP18206 AC145423.3-201ENST00000615987 467 ntBASIC14.97□□□□□ -0.01
VCLP18206 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.97□□□□□ -0.01
VCLP18206 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.97□□□□□ -0.01
VCLP18206 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.97□□□□□ -0.01
VCLP18206 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.97□□□□□ -0.01
VCLP18206 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.97□□□□□ -0.01
VCLP18206 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VCLP18206 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VCLP18206 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VCLP18206 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VCLP18206 AL360270.3-201ENST00000609118 1348 ntBASIC14.96□□□□□ -0.01
VCLP18206 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
VCLP18206 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VCLP18206 AC067750.1-201ENST00000608826 6545 ntBASIC14.96□□□□□ -0.01
VCLP18206 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VCLP18206 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms