Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC24.41■■□□□ 1.5
CFTRP13569 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
CFTRP13569 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CFTRP13569 SSR4-202ENST00000370085 526 ntTSL 2 BASIC24.4■■□□□ 1.5
CFTRP13569 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
CFTRP13569 HLA-DMA-202ENST00000395303 1007 ntBASIC24.4■■□□□ 1.5
CFTRP13569 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC24.4■■□□□ 1.5
CFTRP13569 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CFTRP13569 AC136604.1-202ENST00000425471 771 ntBASIC24.4■■□□□ 1.5
CFTRP13569 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC24.4■■□□□ 1.5
CFTRP13569 MYADML-201ENST00000474610 2147 ntBASIC24.4■■□□□ 1.5
CFTRP13569 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC24.4■■□□□ 1.5
CFTRP13569 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC24.4■■□□□ 1.5
CFTRP13569 BX322534.1-201ENST00000635574 241 ntBASIC24.4■■□□□ 1.5
CFTRP13569 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC24.4■■□□□ 1.5
CFTRP13569 AC215524.1-201ENST00000635696 241 ntBASIC24.4■■□□□ 1.5
CFTRP13569 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC24.4■■□□□ 1.5
CFTRP13569 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CFTRP13569 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
CFTRP13569 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC24.4■■□□□ 1.5
CFTRP13569 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CFTRP13569 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC24.4■■□□□ 1.5
CFTRP13569 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CFTRP13569 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CFTRP13569 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC24.39■■□□□ 1.5
CFTRP13569 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
CFTRP13569 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
CFTRP13569 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.5
CFTRP13569 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CFTRP13569 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC24.39■■□□□ 1.5
CFTRP13569 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CFTRP13569 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC24.39■■□□□ 1.5
CFTRP13569 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
CFTRP13569 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CFTRP13569 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC24.39■■□□□ 1.5
CFTRP13569 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC24.39■■□□□ 1.5
CFTRP13569 AC110057.1-201ENST00000636031 898 ntBASIC24.39■■□□□ 1.5
CFTRP13569 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC24.39■■□□□ 1.5
CFTRP13569 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CFTRP13569 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CFTRP13569 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CFTRP13569 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
CFTRP13569 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CFTRP13569 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC24.39■■□□□ 1.49
CFTRP13569 CES3-203ENST00000543856 3178 ntTSL 2 BASIC24.39■■□□□ 1.49
CFTRP13569 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CFTRP13569 RPL13AP3-202ENST00000494676 1473 ntBASIC24.39■■□□□ 1.49
CFTRP13569 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CFTRP13569 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC24.39■■□□□ 1.49
CFTRP13569 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
CFTRP13569 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CFTRP13569 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CFTRP13569 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC24.39■■□□□ 1.49
CFTRP13569 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC24.38■■□□□ 1.49
CFTRP13569 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CFTRP13569 HNRNPA1P21-201ENST00000424115 961 ntBASIC24.38■■□□□ 1.49
CFTRP13569 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC24.38■■□□□ 1.49
CFTRP13569 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC24.38■■□□□ 1.49
CFTRP13569 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC24.38■■□□□ 1.49
CFTRP13569 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC24.38■■□□□ 1.49
CFTRP13569 AC006116.2-201ENST00000589958 988 ntBASIC24.38■■□□□ 1.49
CFTRP13569 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC24.38■■□□□ 1.49
CFTRP13569 AL049840.2-201ENST00000602722 535 ntBASIC24.38■■□□□ 1.49
CFTRP13569 AC113385.2-201ENST00000614465 762 ntBASIC24.38■■□□□ 1.49
CFTRP13569 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC24.38■■□□□ 1.49
CFTRP13569 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC24.38■■□□□ 1.49
CFTRP13569 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 AC020931.1-201ENST00000589622 1346 ntBASIC24.38■■□□□ 1.49
CFTRP13569 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC24.38■■□□□ 1.49
CFTRP13569 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC24.38■■□□□ 1.49
CFTRP13569 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 ACTBP14-201ENST00000411655 1089 ntBASIC24.38■■□□□ 1.49
CFTRP13569 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC24.38■■□□□ 1.49
CFTRP13569 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC24.38■■□□□ 1.49
CFTRP13569 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC24.38■■□□□ 1.49
CFTRP13569 SRP14-208ENST00000560773 468 ntTSL 3 BASIC24.38■■□□□ 1.49
CFTRP13569 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC24.38■■□□□ 1.49
CFTRP13569 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CFTRP13569 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFTRP13569 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC24.38■■□□□ 1.49
CFTRP13569 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC24.38■■□□□ 1.49
CFTRP13569 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CFTRP13569 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms