Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CD28P10747 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CD28P10747 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.61□□□□□ -0.55
CD28P10747 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
CD28P10747 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 AC023024.2-201ENST00000623561 1993 ntBASIC11.6□□□□□ -0.55
CD28P10747 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CD28P10747 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.6□□□□□ -0.55
CD28P10747 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.6□□□□□ -0.55
CD28P10747 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 AL008707.1-201ENST00000422498 534 ntBASIC11.6□□□□□ -0.55
CD28P10747 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.6□□□□□ -0.55
CD28P10747 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 PARP8-218ENST00000513738 596 ntTSL 4 BASIC11.6□□□□□ -0.55
CD28P10747 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.6□□□□□ -0.55
CD28P10747 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC11.6□□□□□ -0.55
CD28P10747 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC11.6□□□□□ -0.55
CD28P10747 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.6□□□□□ -0.55
CD28P10747 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
CD28P10747 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC11.6□□□□□ -0.55
CD28P10747 DUX4L46-201ENST00000566845 751 ntBASIC11.6□□□□□ -0.55
CD28P10747 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC11.6□□□□□ -0.55
CD28P10747 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CD28P10747 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC11.6□□□□□ -0.55
CD28P10747 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
CD28P10747 AC009955.4-201ENST00000597192 544 ntBASIC11.6□□□□□ -0.55
CD28P10747 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 AL645939.5-201ENST00000606834 243 ntBASIC11.6□□□□□ -0.55
CD28P10747 AC091812.3-201ENST00000621362 345 ntBASIC11.6□□□□□ -0.55
CD28P10747 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.6□□□□□ -0.55
CD28P10747 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.6□□□□□ -0.55
CD28P10747 C18orf15-201ENST00000623680 2534 ntBASIC11.6□□□□□ -0.55
CD28P10747 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 AP000845.1-201ENST00000581677 2131 ntBASIC11.6□□□□□ -0.55
CD28P10747 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 AC087386.2-201ENST00000623212 4637 ntBASIC11.6□□□□□ -0.55
CD28P10747 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.6□□□□□ -0.55
CD28P10747 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CD28P10747 AC022532.1-201ENST00000624563 1728 ntBASIC11.6□□□□□ -0.55
CD28P10747 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.6□□□□□ -0.55
CD28P10747 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CD28P10747 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CD28P10747 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 AL136379.1-201ENST00000623471 2642 ntBASIC11.59□□□□□ -0.55
CD28P10747 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.59□□□□□ -0.55
CD28P10747 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CD28P10747 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CD28P10747 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CD28P10747 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms