Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.07□□□□□ -0.32
UBCP0CG48 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
UBCP0CG48 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.07□□□□□ -0.32
UBCP0CG48 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.07□□□□□ -0.32
UBCP0CG48 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.07□□□□□ -0.32
UBCP0CG48 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.07□□□□□ -0.32
UBCP0CG48 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 AC092364.2-202ENST00000597012 1073 ntBASIC13.07□□□□□ -0.32
UBCP0CG48 AL390955.2-201ENST00000603032 514 ntBASIC13.07□□□□□ -0.32
UBCP0CG48 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.07□□□□□ -0.32
UBCP0CG48 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.07□□□□□ -0.32
UBCP0CG48 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.07□□□□□ -0.32
UBCP0CG48 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.07□□□□□ -0.32
UBCP0CG48 AC011474.4-201ENST00000623523 2076 ntBASIC13.07□□□□□ -0.32
UBCP0CG48 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 DMBT1P1-203ENST00000636837 4628 ntBASIC13.07□□□□□ -0.32
UBCP0CG48 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBCP0CG48 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.07□□□□□ -0.32
UBCP0CG48 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.07□□□□□ -0.32
UBCP0CG48 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.07□□□□□ -0.32
UBCP0CG48 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.07□□□□□ -0.32
UBCP0CG48 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBCP0CG48 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBCP0CG48 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.06□□□□□ -0.32
UBCP0CG48 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.06□□□□□ -0.32
UBCP0CG48 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.06□□□□□ -0.32
UBCP0CG48 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UBCP0CG48 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
UBCP0CG48 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.06□□□□□ -0.32
UBCP0CG48 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.06□□□□□ -0.32
UBCP0CG48 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.06□□□□□ -0.32
UBCP0CG48 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.06□□□□□ -0.32
UBCP0CG48 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.06□□□□□ -0.32
UBCP0CG48 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.06□□□□□ -0.32
UBCP0CG48 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.06□□□□□ -0.32
UBCP0CG48 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
UBCP0CG48 AC004890.2-204ENST00000481968 304 ntBASIC13.06□□□□□ -0.32
UBCP0CG48 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.06□□□□□ -0.32
UBCP0CG48 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.06□□□□□ -0.32
UBCP0CG48 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.06□□□□□ -0.32
UBCP0CG48 AC120045.2-201ENST00000567334 178 ntBASIC13.06□□□□□ -0.32
UBCP0CG48 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
UBCP0CG48 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.06□□□□□ -0.32
UBCP0CG48 BRI3BPP1-201ENST00000594224 787 ntBASIC13.06□□□□□ -0.32
UBCP0CG48 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.06□□□□□ -0.32
UBCP0CG48 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.06□□□□□ -0.32
UBCP0CG48 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
UBCP0CG48 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.06□□□□□ -0.32
UBCP0CG48 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.06□□□□□ -0.32
UBCP0CG48 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.06□□□□□ -0.32
UBCP0CG48 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBCP0CG48 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
UBCP0CG48 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms