Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 RNU1-114P-201ENST00000365297 166 ntBASIC16.12■□□□□ 0.17
CCDC172P0C7W6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 AC007969.1-201ENST00000433675 447 ntBASIC16.12■□□□□ 0.17
CCDC172P0C7W6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 KRT18P25-201ENST00000508931 1278 ntBASIC16.12■□□□□ 0.17
CCDC172P0C7W6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 AL359711.2-201ENST00000563105 872 ntBASIC16.12■□□□□ 0.17
CCDC172P0C7W6 GPALPP1-207ENST00000611650 899 ntBASIC16.12■□□□□ 0.17
CCDC172P0C7W6 MIR8072-201ENST00000614241 80 ntBASIC16.12■□□□□ 0.17
CCDC172P0C7W6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC172P0C7W6 AC006504.5-208ENST00000588784 2401 ntBASIC16.11■□□□□ 0.17
CCDC172P0C7W6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 PMS2P2-201ENST00000425039 1128 ntBASIC16.11■□□□□ 0.17
CCDC172P0C7W6 SPTLC1P1-201ENST00000447199 261 ntBASIC16.11■□□□□ 0.17
CCDC172P0C7W6 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.11■□□□□ 0.17
CCDC172P0C7W6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC172P0C7W6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.1■□□□□ 0.17
CCDC172P0C7W6 AC026434.2-201ENST00000506094 1078 ntBASIC16.1■□□□□ 0.17
CCDC172P0C7W6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 AC092364.2-202ENST00000597012 1073 ntBASIC16.1■□□□□ 0.17
CCDC172P0C7W6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC172P0C7W6 AC004233.3-201ENST00000607794 1269 ntBASIC16.1■□□□□ 0.17
CCDC172P0C7W6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms