Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CAPN1P07384 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CAPN1P07384 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CAPN1P07384 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAPN1P07384 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CAPN1P07384 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPN1P07384 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CAPN1P07384 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.66□□□□□ -0.06
CAPN1P07384 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN1P07384 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPN1P07384 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CAPN1P07384 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CAPN1P07384 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CAPN1P07384 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.66□□□□□ -0.06
CAPN1P07384 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPN1P07384 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.66□□□□□ -0.06
CAPN1P07384 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CAPN1P07384 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.66□□□□□ -0.06
CAPN1P07384 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.66□□□□□ -0.06
CAPN1P07384 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CAPN1P07384 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAPN1P07384 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAPN1P07384 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CAPN1P07384 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CAPN1P07384 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CAPN1P07384 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAPN1P07384 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CAPN1P07384 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 KLF2P4-201ENST00000451959 1225 ntBASIC14.65□□□□□ -0.06
CAPN1P07384 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CAPN1P07384 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.65□□□□□ -0.06
CAPN1P07384 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CAPN1P07384 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 AC093813.1-201ENST00000605066 256 ntBASIC14.65□□□□□ -0.06
CAPN1P07384 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.65□□□□□ -0.06
CAPN1P07384 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 AL137784.3-201ENST00000623858 2288 ntBASIC14.65□□□□□ -0.06
CAPN1P07384 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CAPN1P07384 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAPN1P07384 AC027601.5-201ENST00000624065 2482 ntBASIC14.65□□□□□ -0.06
CAPN1P07384 AC134312.5-201ENST00000568031 1313 ntBASIC14.65□□□□□ -0.06
CAPN1P07384 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.65□□□□□ -0.06
CAPN1P07384 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms