Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 AC023141.5-201ENST00000458585 616 ntBASIC11.32□□□□□ -0.6
TCRAP04437 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 PGAM5P1-201ENST00000518923 814 ntBASIC11.32□□□□□ -0.6
TCRAP04437 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.32□□□□□ -0.6
TCRAP04437 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.32□□□□□ -0.6
TCRAP04437 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 TIMM17BP1-201ENST00000545713 516 ntBASIC11.32□□□□□ -0.6
TCRAP04437 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.32□□□□□ -0.6
TCRAP04437 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 TEX28P1-201ENST00000613479 1221 ntBASIC11.32□□□□□ -0.6
TCRAP04437 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 TEX28P2-201ENST00000617764 1221 ntBASIC11.32□□□□□ -0.6
TCRAP04437 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.32□□□□□ -0.6
TCRAP04437 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TCRAP04437 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 CLK3P2-201ENST00000427566 1453 ntBASIC11.32□□□□□ -0.6
TCRAP04437 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.31□□□□□ -0.6
TCRAP04437 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TCRAP04437 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 AC111170.3-201ENST00000624282 2464 ntBASIC11.31□□□□□ -0.6
TCRAP04437 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
TCRAP04437 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TCRAP04437 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TCRAP04437 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.31□□□□□ -0.6
TCRAP04437 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.31□□□□□ -0.6
TCRAP04437 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.31□□□□□ -0.6
TCRAP04437 FDX1P1-201ENST00000449115 551 ntBASIC11.31□□□□□ -0.6
TCRAP04437 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.31□□□□□ -0.6
TCRAP04437 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.31□□□□□ -0.6
TCRAP04437 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.31□□□□□ -0.6
TCRAP04437 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.31□□□□□ -0.6
TCRAP04437 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.31□□□□□ -0.6
TCRAP04437 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.31□□□□□ -0.6
TCRAP04437 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.31□□□□□ -0.6
TCRAP04437 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TCRAP04437 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.31□□□□□ -0.6
TCRAP04437 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.31□□□□□ -0.6
TCRAP04437 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TCRAP04437 AC090643.2-201ENST00000623442 2029 ntBASIC11.31□□□□□ -0.6
TCRAP04437 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TCRAP04437 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.31□□□□□ -0.6
TCRAP04437 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.31□□□□□ -0.6
TCRAP04437 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TCRAP04437 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms