Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFBP01127 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFBP01127 AL591122.2-201ENST00000624125 1853 ntBASIC14.63□□□□□ -0.07
PDGFBP01127 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.63□□□□□ -0.07
PDGFBP01127 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFBP01127 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFBP01127 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PDGFBP01127 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.63□□□□□ -0.07
PDGFBP01127 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDGFBP01127 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 AC105250.1-201ENST00000509378 2057 ntBASIC14.62□□□□□ -0.07
PDGFBP01127 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PDGFBP01127 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PDGFBP01127 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PDGFBP01127 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 PCDHA14-201ENST00000506751 2298 ntBASIC14.62□□□□□ -0.07
PDGFBP01127 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PDGFBP01127 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PDGFBP01127 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 AC008026.2-201ENST00000495438 348 ntBASIC14.62□□□□□ -0.07
PDGFBP01127 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.62□□□□□ -0.07
PDGFBP01127 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.62□□□□□ -0.07
PDGFBP01127 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
PDGFBP01127 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.62□□□□□ -0.07
PDGFBP01127 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.62□□□□□ -0.07
PDGFBP01127 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC14.62□□□□□ -0.07
PDGFBP01127 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.62□□□□□ -0.07
PDGFBP01127 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.62□□□□□ -0.07
PDGFBP01127 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.62□□□□□ -0.07
PDGFBP01127 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDGFBP01127 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFBP01127 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PDGFBP01127 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PDGFBP01127 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFBP01127 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFBP01127 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFBP01127 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PDGFBP01127 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.61□□□□□ -0.07
PDGFBP01127 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
PDGFBP01127 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFBP01127 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.61□□□□□ -0.07
PDGFBP01127 AC092612.1-201ENST00000514501 998 ntBASIC14.61□□□□□ -0.07
PDGFBP01127 IGHV1-12-201ENST00000518307 205 ntBASIC14.61□□□□□ -0.07
PDGFBP01127 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.61□□□□□ -0.07
PDGFBP01127 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
PDGFBP01127 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PDGFBP01127 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.61□□□□□ -0.07
PDGFBP01127 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.61□□□□□ -0.07
PDGFBP01127 AC023968.2-201ENST00000560593 1049 ntBASIC14.61□□□□□ -0.07
PDGFBP01127 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFBP01127 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFBP01127 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.61□□□□□ -0.07
PDGFBP01127 AP000769.1-203ENST00000637245 208 ntBASIC14.61□□□□□ -0.07
PDGFBP01127 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PDGFBP01127 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
PDGFBP01127 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFBP01127 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms