Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
GPC4O75487 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GPC4O75487 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC4O75487 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.94□□□□□ -0.02
GPC4O75487 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.94□□□□□ -0.02
GPC4O75487 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.93□□□□□ -0.02
GPC4O75487 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.93□□□□□ -0.02
GPC4O75487 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.93□□□□□ -0.02
GPC4O75487 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.93□□□□□ -0.02
GPC4O75487 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.93□□□□□ -0.02
GPC4O75487 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
GPC4O75487 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.93□□□□□ -0.02
GPC4O75487 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.93□□□□□ -0.02
GPC4O75487 ACTBP8-201ENST00000403258 1108 ntBASIC14.93□□□□□ -0.02
GPC4O75487 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.93□□□□□ -0.02
GPC4O75487 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.93□□□□□ -0.02
GPC4O75487 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GPC4O75487 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.93□□□□□ -0.02
GPC4O75487 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.93□□□□□ -0.02
GPC4O75487 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.93□□□□□ -0.02
GPC4O75487 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.93□□□□□ -0.02
GPC4O75487 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 LINC02084-201ENST00000606069 1096 ntBASIC14.93□□□□□ -0.02
GPC4O75487 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 AC105233.6-201ENST00000642093 218 ntBASIC14.93□□□□□ -0.02
GPC4O75487 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
GPC4O75487 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.93□□□□□ -0.02
GPC4O75487 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.93□□□□□ -0.02
GPC4O75487 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
GPC4O75487 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GPC4O75487 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 CU639417.3-201ENST00000624240 1404 ntBASIC14.92□□□□□ -0.02
GPC4O75487 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
GPC4O75487 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.92□□□□□ -0.02
GPC4O75487 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GPC4O75487 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GPC4O75487 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.92□□□□□ -0.02
GPC4O75487 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GPC4O75487 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GPC4O75487 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GPC4O75487 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.92□□□□□ -0.02
GPC4O75487 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
GPC4O75487 COX5BP8-201ENST00000416911 349 ntBASIC14.92□□□□□ -0.02
GPC4O75487 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.92□□□□□ -0.02
GPC4O75487 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.92□□□□□ -0.02
GPC4O75487 MIR5189-201ENST00000577370 114 ntBASIC14.92□□□□□ -0.02
GPC4O75487 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.92□□□□□ -0.02
GPC4O75487 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GPC4O75487 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GPC4O75487 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 AC018442.1-201ENST00000421439 2061 ntBASIC14.92□□□□□ -0.02
GPC4O75487 AC005840.4-201ENST00000541242 2494 ntBASIC14.92□□□□□ -0.02
GPC4O75487 AC027601.5-201ENST00000624065 2482 ntBASIC14.92□□□□□ -0.02
GPC4O75487 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.92□□□□□ -0.02
GPC4O75487 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.92□□□□□ -0.02
GPC4O75487 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms