Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC242376.2-201ENST00000619355 883 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.2■□□□□ 0.34
CTNND1O60716 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.2■□□□□ 0.34
CTNND1O60716 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.2■□□□□ 0.34
CTNND1O60716 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 AC009093.10-201ENST00000641956 1442 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CTNND1O60716 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 KRT18P9-201ENST00000604826 1300 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CTNND1O60716 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CTNND1O60716 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.19■□□□□ 0.34
CTNND1O60716 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.19■□□□□ 0.34
CTNND1O60716 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.19■□□□□ 0.34
CTNND1O60716 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CTNND1O60716 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CTNND1O60716 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 RPL7P35-201ENST00000446943 740 ntBASIC17.19■□□□□ 0.34
CTNND1O60716 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.19■□□□□ 0.34
CTNND1O60716 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.19■□□□□ 0.34
CTNND1O60716 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.19■□□□□ 0.34
CTNND1O60716 AC005632.3-201ENST00000605544 308 ntBASIC17.19■□□□□ 0.34
CTNND1O60716 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.19■□□□□ 0.34
CTNND1O60716 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.19■□□□□ 0.34
CTNND1O60716 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.19■□□□□ 0.34
CTNND1O60716 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTNND1O60716 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.18■□□□□ 0.34
CTNND1O60716 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CTNND1O60716 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CTNND1O60716 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CTNND1O60716 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 KRT8P28-201ENST00000433288 1390 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 AL136172.1-201ENST00000598590 1394 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.18■□□□□ 0.34
CTNND1O60716 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.18■□□□□ 0.34
CTNND1O60716 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CTNND1O60716 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 MIR557-201ENST00000385239 98 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 AL583805.1-201ENST00000391389 531 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.18■□□□□ 0.34
CTNND1O60716 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.18■□□□□ 0.34
CTNND1O60716 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.18■□□□□ 0.34
CTNND1O60716 RPSAP15-201ENST00000448168 861 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 DUTP3-201ENST00000450025 415 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 RN7SL8P-201ENST00000461771 266 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.18■□□□□ 0.34
CTNND1O60716 AP002803.1-201ENST00000528836 498 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 PGAM1P5-201ENST00000548011 764 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.18■□□□□ 0.34
CTNND1O60716 SIGLEC18P-201ENST00000602271 909 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CTNND1O60716 AC092135.3-201ENST00000624151 1846 ntBASIC17.18■□□□□ 0.34
CTNND1O60716 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.18■□□□□ 0.34
CTNND1O60716 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.18■□□□□ 0.34
CTNND1O60716 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.18■□□□□ 0.34
CTNND1O60716 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms