Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CLOCKO15516 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.18□□□□□ -0.14
CLOCKO15516 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.18□□□□□ -0.14
CLOCKO15516 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CLOCKO15516 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.18□□□□□ -0.14
CLOCKO15516 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.18□□□□□ -0.14
CLOCKO15516 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.18□□□□□ -0.14
CLOCKO15516 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.18□□□□□ -0.14
CLOCKO15516 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.18□□□□□ -0.14
CLOCKO15516 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.18□□□□□ -0.14
CLOCKO15516 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.18□□□□□ -0.14
CLOCKO15516 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.18□□□□□ -0.14
CLOCKO15516 RN7SL204P-201ENST00000582831 262 ntBASIC14.18□□□□□ -0.14
CLOCKO15516 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 RN7SL828P-201ENST00000607615 303 ntBASIC14.18□□□□□ -0.14
CLOCKO15516 SPDYE12P-201ENST00000618416 771 ntBASIC14.18□□□□□ -0.14
CLOCKO15516 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.18□□□□□ -0.14
CLOCKO15516 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.18□□□□□ -0.14
CLOCKO15516 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLOCKO15516 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLOCKO15516 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.18□□□□□ -0.14
CLOCKO15516 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.18□□□□□ -0.14
CLOCKO15516 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLOCKO15516 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
CLOCKO15516 KRT8P24-201ENST00000560290 1559 ntBASIC14.17□□□□□ -0.14
CLOCKO15516 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLOCKO15516 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLOCKO15516 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLOCKO15516 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.17□□□□□ -0.14
CLOCKO15516 AC100757.3-201ENST00000622361 1406 ntBASIC14.17□□□□□ -0.14
CLOCKO15516 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.17□□□□□ -0.14
CLOCKO15516 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.17□□□□□ -0.14
CLOCKO15516 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.17□□□□□ -0.14
CLOCKO15516 Z82170.1-201ENST00000625081 3192 ntBASIC14.17□□□□□ -0.14
CLOCKO15516 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.17□□□□□ -0.14
CLOCKO15516 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 AC074338.1-201ENST00000416825 156 ntBASIC14.17□□□□□ -0.14
CLOCKO15516 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.17□□□□□ -0.14
CLOCKO15516 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLOCKO15516 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.17□□□□□ -0.14
CLOCKO15516 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.17□□□□□ -0.14
CLOCKO15516 AC190387.1-201ENST00000551683 408 ntBASIC14.17□□□□□ -0.14
CLOCKO15516 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.17□□□□□ -0.14
CLOCKO15516 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.17□□□□□ -0.14
CLOCKO15516 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.17□□□□□ -0.14
CLOCKO15516 AL133215.2-201ENST00000609242 977 ntBASIC14.17□□□□□ -0.14
CLOCKO15516 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.17□□□□□ -0.14
CLOCKO15516 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLOCKO15516 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLOCKO15516 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.17□□□□□ -0.14
CLOCKO15516 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLOCKO15516 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.17□□□□□ -0.14
CLOCKO15516 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLOCKO15516 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.16□□□□□ -0.14
CLOCKO15516 AGGF1P1-201ENST00000509500 2073 ntBASIC14.16□□□□□ -0.14
CLOCKO15516 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.16□□□□□ -0.14
CLOCKO15516 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.16□□□□□ -0.14
CLOCKO15516 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.16□□□□□ -0.14
CLOCKO15516 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLOCKO15516 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms