Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NBN-203ENST00000409330 4523 ntTSL 5 BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PENK-208ENST00000523051 772 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TK2-213ENST00000563369 882 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AL161645.1-201ENST00000622716 1255 ntBASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AL355877.3-201ENST00000622820 899 ntBASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC107918.4-202ENST00000641623 219 ntBASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TMEM256-PLSCR3K7ERE1 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms