Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 SERBP1P3-201ENST00000459980 809 ntBASIC15.42■□□□□ 0.06
SRRM3A6NNA2 PRYP6-201ENST00000514804 343 ntBASIC15.42■□□□□ 0.06
SRRM3A6NNA2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 RPSAP52-203ENST00000622976 1023 ntBASIC15.42■□□□□ 0.06
SRRM3A6NNA2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM3A6NNA2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 AC023794.5-201ENST00000564380 2157 ntBASIC15.41■□□□□ 0.06
SRRM3A6NNA2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 SDHAP3-202ENST00000515467 728 ntBASIC15.41■□□□□ 0.06
SRRM3A6NNA2 AC022447.6-201ENST00000515522 438 ntBASIC15.41■□□□□ 0.06
SRRM3A6NNA2 RRP7BP-205ENST00000566851 833 ntBASIC15.41■□□□□ 0.06
SRRM3A6NNA2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 AC061975.2-201ENST00000581722 295 ntBASIC15.41■□□□□ 0.06
SRRM3A6NNA2 MIR4706-201ENST00000582134 82 ntBASIC15.41■□□□□ 0.06
SRRM3A6NNA2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 AC091271.1-201ENST00000611877 1162 ntBASIC15.41■□□□□ 0.06
SRRM3A6NNA2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 AC114271.1-201ENST00000612689 2813 ntBASIC15.41■□□□□ 0.06
SRRM3A6NNA2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM3A6NNA2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM3A6NNA2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms