Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DGCR5-201ENST00000399539 862 ntBASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.25□□□□□ -0.61
HLA-DRB4X5D2U9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 ACTBP8-201ENST00000403258 1108 ntBASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 AC011495.1-201ENST00000498085 584 ntBASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 AC022137.2-201ENST00000503482 481 ntBASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 CLUHP6-201ENST00000580789 941 ntBASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 AL358472.5-202ENST00000641448 1267 ntBASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HLA-DRB4X5D2U9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms