Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 PCDHA6-201ENST00000378126 3267 ntBASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 AL157996.1-201ENST00000624684 2299 ntBASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 AC102953.2-201ENST00000609755 3026 ntBASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 ELK2BP-201ENST00000415014 1224 ntBASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 CHCHD2P8-201ENST00000429873 447 ntBASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 AC010203.1-204ENST00000548782 407 ntBASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 AL031432.2-201ENST00000566714 459 ntBASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 AL928711.1-201ENST00000570165 459 ntBASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 ITM2C-210ENST00000620962 501 ntBASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.24□□□□□ -0.61
TRAPPC1Q9Y5R8 AL136982.4-201ENST00000437689 1740 ntBASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 AL645937.6-201ENST00000641122 3727 ntBASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 AC136604.1-201ENST00000418535 575 ntBASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 AC061975.2-201ENST00000581722 295 ntBASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRAPPC1Q9Y5R8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms