Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 C1QBPP1-201ENST00000400117 770 ntBASIC14.04□□□□□ -0.16
VAPAQ9P0L0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 MIR1233-2-201ENST00000408138 82 ntBASIC14.04□□□□□ -0.16
VAPAQ9P0L0 MIR1233-1-201ENST00000408722 82 ntBASIC14.04□□□□□ -0.16
VAPAQ9P0L0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 MRPS18AP1-201ENST00000414458 589 ntBASIC14.04□□□□□ -0.16
VAPAQ9P0L0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 AP001160.2-201ENST00000596071 487 ntBASIC14.04□□□□□ -0.16
VAPAQ9P0L0 AC004466.1-201ENST00000599515 1080 ntBASIC14.04□□□□□ -0.16
VAPAQ9P0L0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 AC007326.2-201ENST00000624224 7579 ntBASIC14.03□□□□□ -0.16
VAPAQ9P0L0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 AC124283.3-201ENST00000570869 594 ntBASIC14.03□□□□□ -0.16
VAPAQ9P0L0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAPAQ9P0L0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 FAM90A12P-201ENST00000519497 2375 ntBASIC14.02□□□□□ -0.16
VAPAQ9P0L0 FAM90A24P-201ENST00000520792 2369 ntBASIC14.02□□□□□ -0.16
VAPAQ9P0L0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms