Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 Z97205.2-201ENST00000564697 1639 ntBASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCM2LQ9NUG4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 MIR658-201ENST00000385210 100 ntBASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AL512384.1-201ENST00000406683 331 ntBASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC009477.1-201ENST00000452936 217 ntBASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC009407.1-201ENST00000568958 598 ntBASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC132938.2-201ENST00000579188 680 ntBASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AL162274.1-201ENST00000617191 1098 ntBASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AL591163.1-201ENST00000641757 987 ntBASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC073548.1-201ENST00000624088 1882 ntBASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 CICP16-201ENST00000502609 2813 ntBASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
CCM2LQ9NUG4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.17□□□□□ -0.14
CCM2LQ9NUG4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms