Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 MYADML-201ENST00000474610 2147 ntBASIC16.6■□□□□ 0.25
TRIM5Q9C035 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 AL627223.1-201ENST00000416693 442 ntBASIC16.6■□□□□ 0.25
TRIM5Q9C035 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 AL591122.2-201ENST00000624125 1853 ntBASIC16.6■□□□□ 0.25
TRIM5Q9C035 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM5Q9C035 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM5Q9C035 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 AC093520.2-201ENST00000561830 333 ntBASIC16.59■□□□□ 0.25
TRIM5Q9C035 AC040169.1-201ENST00000565382 521 ntBASIC16.59■□□□□ 0.25
TRIM5Q9C035 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 AC011840.2-201ENST00000563063 1520 ntBASIC16.59■□□□□ 0.25
TRIM5Q9C035 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 AL158070.2-201ENST00000623713 1621 ntBASIC16.59■□□□□ 0.25
TRIM5Q9C035 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM5Q9C035 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM5Q9C035 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM5Q9C035 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM5Q9C035 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.58■□□□□ 0.25
TRIM5Q9C035 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM5Q9C035 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRIM5Q9C035 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM5Q9C035 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM5Q9C035 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM5Q9C035 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRIM5Q9C035 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM5Q9C035 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM5Q9C035 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM5Q9C035 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM5Q9C035 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms