Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 VDAC2P4-201ENST00000452925 711 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AL020994.1-201ENST00000454387 578 ntTSL 4 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 Z82190.1-201ENST00000454534 490 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 LARP1BP2-201ENST00000486594 519 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC008837.1-201ENST00000511513 412 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 RARRES2P4-201ENST00000514074 484 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 RNU6-1170P-201ENST00000515974 106 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC024224.1-201ENST00000538284 609 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 HIGD1AP17-201ENST00000554576 276 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 HMGB1P33-201ENST00000563485 527 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC046185.2-201ENST00000603263 413 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 OR4E1-201ENST00000610316 900 ntAPPRIS ALT1 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC092329.4-211ENST00000638919 579 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AL133268.1-201ENST00000405676 1401 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 TFDP2-209ENST00000477292 1403 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 NACA3P-201ENST00000359690 648 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 RNU6-379P-201ENST00000363813 104 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 SNORD50B-201ENST00000364995 70 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 Y_RNA.474-201ENST00000384341 102 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 KRT18P68-201ENST00000392293 1000 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 PPM1N-202ENST00000396736 527 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AL022400.1-201ENST00000423946 935 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 HNRNPA1P31-201ENST00000448627 970 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 FDX1P1-201ENST00000449115 551 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC104417.1-201ENST00000523974 751 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms