Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TUBA1CQ9BQE3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.08□□□□□ -0.15
TUBA1CQ9BQE3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.08□□□□□ -0.15
TUBA1CQ9BQE3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TUBA1CQ9BQE3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.08□□□□□ -0.15
TUBA1CQ9BQE3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 GK-202ENST00000378941 458 ntTSL 3 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 GHSR-202ENST00000427970 912 ntBASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 RN7SL837P-201ENST00000463010 287 ntBASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 AP000845.1-201ENST00000581677 2131 ntBASIC14.08□□□□□ -0.16
TUBA1CQ9BQE3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.07□□□□□ -0.16
TUBA1CQ9BQE3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms