Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NDNQ99608 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NDNQ99608 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NDNQ99608 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NDNQ99608 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NDNQ99608 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.96□□□□□ -0.01
NDNQ99608 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NDNQ99608 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.96□□□□□ -0.01
NDNQ99608 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.96□□□□□ -0.01
NDNQ99608 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.96□□□□□ -0.01
NDNQ99608 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NDNQ99608 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NDNQ99608 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NDNQ99608 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.96□□□□□ -0.01
NDNQ99608 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.96□□□□□ -0.01
NDNQ99608 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NDNQ99608 DUX4L47-201ENST00000566374 394 ntBASIC14.96□□□□□ -0.01
NDNQ99608 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.96□□□□□ -0.01
NDNQ99608 CTBP2P3-201ENST00000585629 1255 ntBASIC14.96□□□□□ -0.01
NDNQ99608 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.96□□□□□ -0.01
NDNQ99608 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.96□□□□□ -0.01
NDNQ99608 AC133539.2-201ENST00000604757 467 ntBASIC14.96□□□□□ -0.01
NDNQ99608 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.96□□□□□ -0.01
NDNQ99608 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
NDNQ99608 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NDNQ99608 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NDNQ99608 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NDNQ99608 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.96□□□□□ -0.01
NDNQ99608 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NDNQ99608 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
NDNQ99608 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
NDNQ99608 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.96□□□□□ -0.02
NDNQ99608 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NDNQ99608 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NDNQ99608 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NDNQ99608 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NDNQ99608 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
NDNQ99608 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.96□□□□□ -0.02
NDNQ99608 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.96□□□□□ -0.02
NDNQ99608 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NDNQ99608 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.95□□□□□ -0.02
NDNQ99608 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.95□□□□□ -0.02
NDNQ99608 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 AL354702.1-201ENST00000442006 1960 ntBASIC14.95□□□□□ -0.02
NDNQ99608 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.95□□□□□ -0.02
NDNQ99608 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.95□□□□□ -0.02
NDNQ99608 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.95□□□□□ -0.02
NDNQ99608 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
NDNQ99608 AC087499.6-201ENST00000411576 835 ntBASIC14.95□□□□□ -0.02
NDNQ99608 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 EIF3FP3-201ENST00000434851 1086 ntBASIC14.95□□□□□ -0.02
NDNQ99608 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.95□□□□□ -0.02
NDNQ99608 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.95□□□□□ -0.02
NDNQ99608 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.95□□□□□ -0.02
NDNQ99608 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
NDNQ99608 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.95□□□□□ -0.02
NDNQ99608 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.95□□□□□ -0.02
NDNQ99608 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.95□□□□□ -0.02
NDNQ99608 SPCS2P1-201ENST00000561636 679 ntBASIC14.95□□□□□ -0.02
NDNQ99608 TMEM261P1-201ENST00000604899 340 ntBASIC14.95□□□□□ -0.02
NDNQ99608 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
NDNQ99608 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.95□□□□□ -0.02
NDNQ99608 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.95□□□□□ -0.02
NDNQ99608 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NDNQ99608 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.95□□□□□ -0.02
NDNQ99608 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.95□□□□□ -0.02
NDNQ99608 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 AC007326.2-201ENST00000624224 7579 ntBASIC14.95□□□□□ -0.02
NDNQ99608 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.95□□□□□ -0.02
NDNQ99608 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NDNQ99608 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NDNQ99608 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.94□□□□□ -0.02
NDNQ99608 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDNQ99608 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NDNQ99608 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDNQ99608 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.94□□□□□ -0.02
NDNQ99608 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDNQ99608 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms