Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 INTS4P1-203ENST00000641008 3683 ntBASIC13.61□□□□□ -0.23
SNX18Q96RF0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 NUS1P3-201ENST00000423502 862 ntBASIC13.6□□□□□ -0.23
SNX18Q96RF0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 DRD5P1-201ENST00000456605 1438 ntBASIC13.6□□□□□ -0.23
SNX18Q96RF0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 AL662799.1-202ENST00000614205 422 ntBASIC13.6□□□□□ -0.23
SNX18Q96RF0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 AL358472.5-202ENST00000641448 1267 ntBASIC13.6□□□□□ -0.23
SNX18Q96RF0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNX18Q96RF0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
SNX18Q96RF0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 SPTLC1P1-201ENST00000447199 261 ntBASIC13.59□□□□□ -0.23
SNX18Q96RF0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 RPL13AP25-201ENST00000484130 612 ntBASIC13.59□□□□□ -0.23
SNX18Q96RF0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 RRP7BP-205ENST00000566851 833 ntBASIC13.59□□□□□ -0.23
SNX18Q96RF0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 AC008738.7-201ENST00000609744 511 ntBASIC13.59□□□□□ -0.23
SNX18Q96RF0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms