Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 AC006033.1-201ENST00000440505 426 ntBASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 AC021723.1-201ENST00000486306 515 ntBASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 AP001258.2-201ENST00000529891 490 ntBASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 AC100827.2-201ENST00000563214 1194 ntBASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 NAT9-222ENST00000583476 583 ntTSL 3 BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 AL118558.3-201ENST00000607414 1079 ntBASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 AC007292.2-201ENST00000593524 1812 ntBASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
UBE2E2Q96LR5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AC018442.1-201ENST00000421439 2061 ntBASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AC126915.1-201ENST00000522847 1038 ntBASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AC243960.2-201ENST00000600996 747 ntBASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AC007663.3-201ENST00000609632 465 ntBASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AC027601.3-201ENST00000622907 509 ntBASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 GRN-222ENST00000639447 1314 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 KRT8P29-201ENST00000420409 1371 ntBASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AL136172.1-201ENST00000598590 1394 ntBASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AC020907.1-201ENST00000616460 1350 ntBASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2E2Q96LR5 AJ011931.1-201ENST00000618749 2492 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms