Protein–RNA interactions for Protein: Q96DC9

OTUB2, Ubiquitin thioesterase OTUB2, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB2Q96DC9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OTUB2Q96DC9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
OTUB2Q96DC9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.02■□□□□ -0
OTUB2Q96DC9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OTUB2Q96DC9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OTUB2Q96DC9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OTUB2Q96DC9 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.02■□□□□ -0
OTUB2Q96DC9 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.02■□□□□ -0
OTUB2Q96DC9 AC073347.1-201ENST00000421633 2643 ntBASIC15.02■□□□□ -0
OTUB2Q96DC9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
OTUB2Q96DC9 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OTUB2Q96DC9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
OTUB2Q96DC9 FAM90A2P-201ENST00000511144 1395 ntBASIC15.02■□□□□ -0
OTUB2Q96DC9 FAM90A25P-201ENST00000528404 1395 ntBASIC15.02■□□□□ -0
OTUB2Q96DC9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.02■□□□□ -0
OTUB2Q96DC9 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OTUB2Q96DC9 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.02■□□□□ -0
OTUB2Q96DC9 ST13P19-201ENST00000442505 1124 ntBASIC15.02■□□□□ -0
OTUB2Q96DC9 CEP164P1-201ENST00000455142 418 ntBASIC15.02■□□□□ -0
OTUB2Q96DC9 AC008723.1-201ENST00000506922 207 ntBASIC15.02■□□□□ -0
OTUB2Q96DC9 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.02■□□□□ -0
OTUB2Q96DC9 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.02■□□□□ -0
OTUB2Q96DC9 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.02■□□□□ -0
OTUB2Q96DC9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.02■□□□□ -0
OTUB2Q96DC9 PRKXP1-201ENST00000561423 1122 ntBASIC15.02■□□□□ -0
OTUB2Q96DC9 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.02■□□□□ -0
OTUB2Q96DC9 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
OTUB2Q96DC9 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
OTUB2Q96DC9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
OTUB2Q96DC9 MIR6769A-201ENST00000617340 73 ntBASIC15.02■□□□□ -0
OTUB2Q96DC9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.02■□□□□ -0
OTUB2Q96DC9 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.02■□□□□ -0
OTUB2Q96DC9 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.02■□□□□ -0
OTUB2Q96DC9 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
OTUB2Q96DC9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
OTUB2Q96DC9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OTUB2Q96DC9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OTUB2Q96DC9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
OTUB2Q96DC9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
OTUB2Q96DC9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
OTUB2Q96DC9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OTUB2Q96DC9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.02□□□□□ -0.01
OTUB2Q96DC9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
OTUB2Q96DC9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 TBC1D3J-201ENST00000620719 1426 ntBASIC15.01□□□□□ -0.01
OTUB2Q96DC9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 AC007326.2-201ENST00000624224 7579 ntBASIC15.01□□□□□ -0.01
OTUB2Q96DC9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 AC091951.1-201ENST00000512854 2465 ntBASIC15.01□□□□□ -0.01
OTUB2Q96DC9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 AC019193.1-201ENST00000506678 823 ntBASIC15.01□□□□□ -0.01
OTUB2Q96DC9 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 LINC01783-202ENST00000614408 828 ntBASIC15.01□□□□□ -0.01
OTUB2Q96DC9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.01□□□□□ -0.01
OTUB2Q96DC9 BX284668.2-205ENST00000619677 828 ntBASIC15.01□□□□□ -0.01
OTUB2Q96DC9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 AC013268.4-201ENST00000637413 2228 ntBASIC15.01□□□□□ -0.01
OTUB2Q96DC9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OTUB2Q96DC9 NORAD-201ENST00000565493 5339 ntBASIC15.01□□□□□ -0.01
OTUB2Q96DC9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15□□□□□ -0.01
OTUB2Q96DC9 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
OTUB2Q96DC9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
OTUB2Q96DC9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
OTUB2Q96DC9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
OTUB2Q96DC9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
OTUB2Q96DC9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
OTUB2Q96DC9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms