Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AL354718.3-201ENST00000616414 581 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 CR382287.1-201ENST00000623954 586 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AL591163.1-201ENST00000641757 987 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AC027601.5-201ENST00000624065 2482 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AC015688.4-201ENST00000580780 1647 ntBASIC13.9□□□□□ -0.19
NUP43Q8NFH3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
NUP43Q8NFH3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NUP43Q8NFH3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
NUP43Q8NFH3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NUP43Q8NFH3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NUP43Q8NFH3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.89□□□□□ -0.19
NUP43Q8NFH3 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AC092933.1-201ENST00000393644 945 ntBASIC13.89□□□□□ -0.19
NUP43Q8NFH3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AC008735.3-201ENST00000596646 500 ntBASIC13.89□□□□□ -0.19
NUP43Q8NFH3 ECM1P1-201ENST00000604092 1279 ntBASIC13.89□□□□□ -0.19
NUP43Q8NFH3 AL022328.1-201ENST00000610050 478 ntBASIC13.89□□□□□ -0.19
NUP43Q8NFH3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP43Q8NFH3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 HSPA7-201ENST00000445535 1927 ntBASIC13.88□□□□□ -0.19
NUP43Q8NFH3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms