Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 MESTP3-201ENST00000503460 968 ntBASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 AP001065.2-201ENST00000617205 644 ntBASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 AC055811.4-201ENST00000624039 1754 ntBASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 RPL18P13-201ENST00000478088 569 ntBASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 POU5F1P2-201ENST00000521750 823 ntBASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 SAMD11P1-201ENST00000571429 661 ntBASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 AL132994.2-201ENST00000603120 687 ntBASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 AC127383.1-201ENST00000444697 1800 ntBASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ZNF248Q8NDW4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF248Q8NDW4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms