Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 UPF3AP2-201ENST00000457924 1132 ntBASIC22.74■■□□□ 1.23
VPS8Q8N3P4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC22.74■■□□□ 1.23
VPS8Q8N3P4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 CCT8L1P-201ENST00000465400 1674 ntBASIC22.73■■□□□ 1.23
VPS8Q8N3P4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 OR2K2-202ENST00000374428 1038 ntBASIC22.73■■□□□ 1.23
VPS8Q8N3P4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 RTN3P1-201ENST00000536295 711 ntBASIC22.73■■□□□ 1.23
VPS8Q8N3P4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS8Q8N3P4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 KRT8P31-201ENST00000504812 1408 ntBASIC22.72■■□□□ 1.23
VPS8Q8N3P4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 AL133499.1-201ENST00000596207 608 ntBASIC22.72■■□□□ 1.23
VPS8Q8N3P4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 AC020910.6-201ENST00000623084 1459 ntBASIC22.72■■□□□ 1.23
VPS8Q8N3P4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
VPS8Q8N3P4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 Z97180.1-201ENST00000445173 988 ntBASIC22.71■■□□□ 1.23
VPS8Q8N3P4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 NDUFS6P1-201ENST00000485187 316 ntBASIC22.71■■□□□ 1.23
VPS8Q8N3P4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC22.71■■□□□ 1.23
VPS8Q8N3P4 AC015967.2-201ENST00000624092 234 ntBASIC22.71■■□□□ 1.23
VPS8Q8N3P4 AC006435.4-201ENST00000625037 234 ntBASIC22.71■■□□□ 1.23
VPS8Q8N3P4 AL356737.1-201ENST00000634391 234 ntBASIC22.71■■□□□ 1.23
VPS8Q8N3P4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms