Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
C9orf40Q8IXQ3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 AL645933.1-201ENST00000440087 609 ntBASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 RNMTL1P1-201ENST00000454103 560 ntBASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 TPT1P11-201ENST00000458482 498 ntBASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 MYADML-201ENST00000474610 2147 ntBASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 Z98259.2-201ENST00000641583 609 ntBASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.62□□□□□ -0.23
C9orf40Q8IXQ3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 AL157407.1-201ENST00000435784 904 ntBASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 FAM58BP-201ENST00000439056 645 ntBASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 TUBB8P8-201ENST00000458717 1058 ntBASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C9orf40Q8IXQ3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms