Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS4Q8IUM7 AC007950.2-201ENST00000615045 2347 ntBASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 AC011270.2-201ENST00000624293 2550 ntBASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 AC138035.3-201ENST00000622706 2791 ntBASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 AL627389.1-201ENST00000413508 1182 ntBASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 KRT8P1-201ENST00000557533 1207 ntBASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 KHSRPP1-201ENST00000427983 1768 ntBASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS4Q8IUM7 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 AC012362.1-201ENST00000434906 739 ntBASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 AP003398.1-201ENST00000531124 318 ntBASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 AC107464.3-201ENST00000609172 737 ntBASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 AL591471.1-201ENST00000621855 229 ntBASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 AC005618.3-201ENST00000624928 458 ntBASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS4Q8IUM7 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms