Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTR9Q6PD62 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTR9Q6PD62 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTR9Q6PD62 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTR9Q6PD62 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 AC092135.3-201ENST00000624151 1846 ntBASIC17.57■□□□□ 0.4
CTR9Q6PD62 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 DPM3-202ENST00000368399 517 ntBASIC17.57■□□□□ 0.4
CTR9Q6PD62 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 TUBB8P8-201ENST00000458717 1058 ntBASIC17.57■□□□□ 0.4
CTR9Q6PD62 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 AC103810.3-201ENST00000583567 96 ntBASIC17.57■□□□□ 0.4
CTR9Q6PD62 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.57■□□□□ 0.4
CTR9Q6PD62 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 AC004899.1-201ENST00000424687 1714 ntBASIC17.57■□□□□ 0.4
CTR9Q6PD62 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 MIR600HG-201ENST00000449175 5984 ntBASIC17.57■□□□□ 0.4
CTR9Q6PD62 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTR9Q6PD62 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.57■□□□□ 0.4
CTR9Q6PD62 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 AL137784.3-201ENST00000623858 2288 ntBASIC17.56■□□□□ 0.4
CTR9Q6PD62 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 AKR7A2P1-201ENST00000460134 915 ntBASIC17.56■□□□□ 0.4
CTR9Q6PD62 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 Z98259.2-201ENST00000641583 609 ntBASIC17.56■□□□□ 0.4
CTR9Q6PD62 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 FGD5P1-202ENST00000614866 2498 ntBASIC17.56■□□□□ 0.4
CTR9Q6PD62 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTR9Q6PD62 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTR9Q6PD62 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms