Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
AP1S1P61966 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
AP1S1P61966 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.88□□□□□ -0.03
AP1S1P61966 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.88□□□□□ -0.03
AP1S1P61966 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.88□□□□□ -0.03
AP1S1P61966 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
AP1S1P61966 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
AP1S1P61966 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.88□□□□□ -0.03
AP1S1P61966 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.88□□□□□ -0.03
AP1S1P61966 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.88□□□□□ -0.03
AP1S1P61966 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
AP1S1P61966 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.88□□□□□ -0.03
AP1S1P61966 FAM8A2P-201ENST00000528813 1142 ntBASIC14.88□□□□□ -0.03
AP1S1P61966 MIR4783-201ENST00000580343 82 ntBASIC14.88□□□□□ -0.03
AP1S1P61966 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.88□□□□□ -0.03
AP1S1P61966 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.88□□□□□ -0.03
AP1S1P61966 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
AP1S1P61966 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.88□□□□□ -0.03
AP1S1P61966 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
AP1S1P61966 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
AP1S1P61966 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
AP1S1P61966 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S1P61966 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
AP1S1P61966 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S1P61966 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
AP1S1P61966 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AP1S1P61966 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.87□□□□□ -0.03
AP1S1P61966 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.87□□□□□ -0.03
AP1S1P61966 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.87□□□□□ -0.03
AP1S1P61966 AC012441.2-201ENST00000444843 739 ntBASIC14.87□□□□□ -0.03
AP1S1P61966 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
AP1S1P61966 TUBB8P8-201ENST00000458717 1058 ntBASIC14.87□□□□□ -0.03
AP1S1P61966 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.87□□□□□ -0.03
AP1S1P61966 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.87□□□□□ -0.03
AP1S1P61966 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.87□□□□□ -0.03
AP1S1P61966 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S1P61966 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.87□□□□□ -0.03
AP1S1P61966 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 RN7SL219P-201ENST00000582872 296 ntBASIC14.87□□□□□ -0.03
AP1S1P61966 MIR6720-201ENST00000611664 98 ntBASIC14.87□□□□□ -0.03
AP1S1P61966 AL023803.2-201ENST00000620080 638 ntBASIC14.87□□□□□ -0.03
AP1S1P61966 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.87□□□□□ -0.03
AP1S1P61966 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.87□□□□□ -0.03
AP1S1P61966 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S1P61966 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S1P61966 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.87□□□□□ -0.03
AP1S1P61966 MYADML-201ENST00000474610 2147 ntBASIC14.87□□□□□ -0.03
AP1S1P61966 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.87□□□□□ -0.03
AP1S1P61966 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
AP1S1P61966 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 AC244394.1-201ENST00000435000 1665 ntBASIC14.87□□□□□ -0.03
AP1S1P61966 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S1P61966 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms