Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.29■□□□□ 0.36
RHBDL3P58872 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDL3P58872 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.29■□□□□ 0.36
RHBDL3P58872 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.29■□□□□ 0.36
RHBDL3P58872 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.28■□□□□ 0.36
RHBDL3P58872 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDL3P58872 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RHBDL3P58872 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDL3P58872 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.28■□□□□ 0.36
RHBDL3P58872 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.28■□□□□ 0.36
RHBDL3P58872 RPS9P1-201ENST00000419943 583 ntBASIC17.28■□□□□ 0.36
RHBDL3P58872 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.28■□□□□ 0.36
RHBDL3P58872 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDL3P58872 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.28■□□□□ 0.36
RHBDL3P58872 AC098935.1-201ENST00000446057 611 ntBASIC17.28■□□□□ 0.36
RHBDL3P58872 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RHBDL3P58872 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RHBDL3P58872 AC008267.1-201ENST00000474858 1069 ntBASIC17.28■□□□□ 0.36
RHBDL3P58872 RN7SL530P-201ENST00000485097 298 ntBASIC17.28■□□□□ 0.36
RHBDL3P58872 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.28■□□□□ 0.36
RHBDL3P58872 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDL3P58872 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.28■□□□□ 0.36
RHBDL3P58872 U62317.3-201ENST00000608319 855 ntBASIC17.28■□□□□ 0.36
RHBDL3P58872 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDL3P58872 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDL3P58872 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
RHBDL3P58872 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RHBDL3P58872 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.27■□□□□ 0.36
RHBDL3P58872 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
RHBDL3P58872 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 KRT18P9-201ENST00000604826 1300 ntBASIC17.27■□□□□ 0.36
RHBDL3P58872 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RHBDL3P58872 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.27■□□□□ 0.36
RHBDL3P58872 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RHBDL3P58872 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.27■□□□□ 0.36
RHBDL3P58872 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 AC215219.1-201ENST00000400706 1817 ntBASIC17.27■□□□□ 0.36
RHBDL3P58872 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RHBDL3P58872 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 AC078991.1-201ENST00000437297 610 ntBASIC17.27■□□□□ 0.36
RHBDL3P58872 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.27■□□□□ 0.36
RHBDL3P58872 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 RN7SL277P-201ENST00000481521 288 ntBASIC17.27■□□□□ 0.36
RHBDL3P58872 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.27■□□□□ 0.36
RHBDL3P58872 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.27■□□□□ 0.36
RHBDL3P58872 AC114947.1-202ENST00000514136 344 ntBASIC17.27■□□□□ 0.36
RHBDL3P58872 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
RHBDL3P58872 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.27■□□□□ 0.36
RHBDL3P58872 SORD2P-201ENST00000558556 1069 ntBASIC17.27■□□□□ 0.36
RHBDL3P58872 NPM1P43-201ENST00000558669 786 ntBASIC17.27■□□□□ 0.36
RHBDL3P58872 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RHBDL3P58872 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.27■□□□□ 0.36
RHBDL3P58872 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.27■□□□□ 0.36
RHBDL3P58872 MIR4522-201ENST00000584932 87 ntBASIC17.27■□□□□ 0.36
RHBDL3P58872 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.27■□□□□ 0.36
RHBDL3P58872 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.27■□□□□ 0.36
RHBDL3P58872 AC087045.2-201ENST00000606279 1003 ntBASIC17.27■□□□□ 0.36
RHBDL3P58872 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RHBDL3P58872 AC242376.2-201ENST00000619355 883 ntBASIC17.27■□□□□ 0.36
RHBDL3P58872 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDL3P58872 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.27■□□□□ 0.36
RHBDL3P58872 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RHBDL3P58872 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDL3P58872 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDL3P58872 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDL3P58872 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDL3P58872 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDL3P58872 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms