Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM11AP58511 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.72□□□□□ -0.21
SMIM11AP58511 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SMIM11AP58511 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.72□□□□□ -0.21
SMIM11AP58511 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SMIM11AP58511 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
SMIM11AP58511 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SMIM11AP58511 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11AP58511 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11AP58511 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.71□□□□□ -0.21
SMIM11AP58511 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11AP58511 AC215219.1-201ENST00000400706 1817 ntBASIC13.71□□□□□ -0.21
SMIM11AP58511 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.71□□□□□ -0.21
SMIM11AP58511 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11AP58511 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM11AP58511 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM11AP58511 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SMIM11AP58511 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM11AP58511 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SMIM11AP58511 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM11AP58511 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11AP58511 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11AP58511 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.71□□□□□ -0.21
SMIM11AP58511 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.71□□□□□ -0.21
SMIM11AP58511 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.71□□□□□ -0.21
SMIM11AP58511 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SMIM11AP58511 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.71□□□□□ -0.21
SMIM11AP58511 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SMIM11AP58511 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SMIM11AP58511 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SMIM11AP58511 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.71□□□□□ -0.21
SMIM11AP58511 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM11AP58511 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.71□□□□□ -0.21
SMIM11AP58511 AL662799.1-202ENST00000614205 422 ntBASIC13.71□□□□□ -0.21
SMIM11AP58511 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.71□□□□□ -0.21
SMIM11AP58511 AC007431.3-201ENST00000623221 587 ntBASIC13.71□□□□□ -0.21
SMIM11AP58511 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.71□□□□□ -0.21
SMIM11AP58511 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SMIM11AP58511 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11AP58511 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SMIM11AP58511 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SMIM11AP58511 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.71□□□□□ -0.22
SMIM11AP58511 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.71□□□□□ -0.22
SMIM11AP58511 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
SMIM11AP58511 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
SMIM11AP58511 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SMIM11AP58511 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SMIM11AP58511 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SMIM11AP58511 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.71□□□□□ -0.22
SMIM11AP58511 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SMIM11AP58511 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11AP58511 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11AP58511 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SMIM11AP58511 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11AP58511 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SMIM11AP58511 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11AP58511 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11AP58511 MRPL37P1-201ENST00000592451 1337 ntBASIC13.7□□□□□ -0.22
SMIM11AP58511 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11AP58511 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SMIM11AP58511 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SMIM11AP58511 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.7□□□□□ -0.22
SMIM11AP58511 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.7□□□□□ -0.22
SMIM11AP58511 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11AP58511 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11AP58511 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11AP58511 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.7□□□□□ -0.22
SMIM11AP58511 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.7□□□□□ -0.22
SMIM11AP58511 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMIM11AP58511 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.7□□□□□ -0.22
SMIM11AP58511 TREML5P-201ENST00000421694 576 ntBASIC13.7□□□□□ -0.22
SMIM11AP58511 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.7□□□□□ -0.22
SMIM11AP58511 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.7□□□□□ -0.22
SMIM11AP58511 GIMAP3P-201ENST00000495150 836 ntBASIC13.7□□□□□ -0.22
SMIM11AP58511 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms