Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VSX2P58304 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.24□□□□□ -0.13
VSX2P58304 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VSX2P58304 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.24□□□□□ -0.13
VSX2P58304 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 FAM86MP-201ENST00000340703 885 ntBASIC14.24□□□□□ -0.13
VSX2P58304 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.24□□□□□ -0.13
VSX2P58304 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VSX2P58304 BTBD6P1-201ENST00000412176 1267 ntBASIC14.24□□□□□ -0.13
VSX2P58304 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.24□□□□□ -0.13
VSX2P58304 MTX1P1-201ENST00000440904 838 ntBASIC14.24□□□□□ -0.13
VSX2P58304 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.24□□□□□ -0.13
VSX2P58304 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.24□□□□□ -0.13
VSX2P58304 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.24□□□□□ -0.13
VSX2P58304 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 AC091271.1-201ENST00000611877 1162 ntBASIC14.24□□□□□ -0.13
VSX2P58304 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.24□□□□□ -0.13
VSX2P58304 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.24□□□□□ -0.13
VSX2P58304 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 AC015818.8-201ENST00000587907 1519 ntBASIC14.24□□□□□ -0.13
VSX2P58304 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.24□□□□□ -0.13
VSX2P58304 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VSX2P58304 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.24□□□□□ -0.13
VSX2P58304 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
VSX2P58304 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.23□□□□□ -0.13
VSX2P58304 LINC01101-201ENST00000622953 1884 ntBASIC14.23□□□□□ -0.13
VSX2P58304 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
VSX2P58304 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 OR2I1P-210ENST00000642037 4691 ntBASIC14.23□□□□□ -0.13
VSX2P58304 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.23□□□□□ -0.13
VSX2P58304 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.23□□□□□ -0.13
VSX2P58304 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 AC079178.1-201ENST00000420915 656 ntBASIC14.23□□□□□ -0.13
VSX2P58304 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 ACTBP11-201ENST00000436287 1126 ntBASIC14.23□□□□□ -0.13
VSX2P58304 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 CHMP1AP1-201ENST00000445563 662 ntBASIC14.23□□□□□ -0.13
VSX2P58304 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.23□□□□□ -0.13
VSX2P58304 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VSX2P58304 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.23□□□□□ -0.13
VSX2P58304 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.23□□□□□ -0.13
VSX2P58304 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.23□□□□□ -0.13
VSX2P58304 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.23□□□□□ -0.13
VSX2P58304 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
VSX2P58304 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.23□□□□□ -0.13
VSX2P58304 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VSX2P58304 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.22□□□□□ -0.13
VSX2P58304 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.22□□□□□ -0.13
VSX2P58304 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VSX2P58304 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.22□□□□□ -0.13
VSX2P58304 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.22□□□□□ -0.13
VSX2P58304 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
VSX2P58304 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VSX2P58304 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VSX2P58304 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.22□□□□□ -0.13
VSX2P58304 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms