Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUP98P52948 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NUP98P52948 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NUP98P52948 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.96■□□□□ 0.47
NUP98P52948 AC011498.7-201ENST00000624986 2027 ntBASIC17.96■□□□□ 0.46
NUP98P52948 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NUP98P52948 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
NUP98P52948 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.95■□□□□ 0.46
NUP98P52948 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.95■□□□□ 0.46
NUP98P52948 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 AC018638.5-201ENST00000450885 754 ntBASIC17.95■□□□□ 0.46
NUP98P52948 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 RN7SL788P-201ENST00000460504 316 ntBASIC17.95■□□□□ 0.46
NUP98P52948 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
NUP98P52948 OR5BD1P-201ENST00000532527 817 ntBASIC17.95■□□□□ 0.46
NUP98P52948 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.95■□□□□ 0.46
NUP98P52948 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC17.95■□□□□ 0.46
NUP98P52948 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.95■□□□□ 0.46
NUP98P52948 TRMT112P3-201ENST00000580149 358 ntBASIC17.95■□□□□ 0.46
NUP98P52948 AC007250.1-201ENST00000608934 338 ntBASIC17.95■□□□□ 0.46
NUP98P52948 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.95■□□□□ 0.46
NUP98P52948 AC025183.3-201ENST00000623526 1482 ntBASIC17.95■□□□□ 0.46
NUP98P52948 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.95■□□□□ 0.46
NUP98P52948 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NUP98P52948 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
NUP98P52948 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
NUP98P52948 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NUP98P52948 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 ALG1L6P-201ENST00000515248 758 ntBASIC17.95■□□□□ 0.46
NUP98P52948 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.95■□□□□ 0.46
NUP98P52948 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.95■□□□□ 0.46
NUP98P52948 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.95■□□□□ 0.46
NUP98P52948 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.95■□□□□ 0.46
NUP98P52948 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC17.95■□□□□ 0.46
NUP98P52948 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NUP98P52948 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NUP98P52948 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NUP98P52948 AC232323.1-201ENST00000540724 2099 ntBASIC17.94■□□□□ 0.46
NUP98P52948 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NUP98P52948 AC090505.1-201ENST00000430515 1834 ntBASIC17.94■□□□□ 0.46
NUP98P52948 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 RPL3P2-204ENST00000413027 1203 ntBASIC17.94■□□□□ 0.46
NUP98P52948 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.94■□□□□ 0.46
NUP98P52948 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.94■□□□□ 0.46
NUP98P52948 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.94■□□□□ 0.46
NUP98P52948 AC141586.1-203ENST00000567242 366 ntBASIC17.94■□□□□ 0.46
NUP98P52948 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.94■□□□□ 0.46
NUP98P52948 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NUP98P52948 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NUP98P52948 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.94■□□□□ 0.46
NUP98P52948 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.94■□□□□ 0.46
NUP98P52948 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
NUP98P52948 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
NUP98P52948 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NUP98P52948 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NUP98P52948 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUP98P52948 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NUP98P52948 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
NUP98P52948 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.93■□□□□ 0.46
NUP98P52948 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.93■□□□□ 0.46
NUP98P52948 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.93■□□□□ 0.46
NUP98P52948 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.93■□□□□ 0.46
NUP98P52948 AL118522.1-201ENST00000611368 560 ntBASIC17.93■□□□□ 0.46
NUP98P52948 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NUP98P52948 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms