Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.41□□□□□ -0.1
PDX1P52945 MIR33B-201ENST00000385104 96 ntBASIC14.41□□□□□ -0.1
PDX1P52945 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
PDX1P52945 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 AC011742.3-201ENST00000439053 820 ntBASIC14.41□□□□□ -0.1
PDX1P52945 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.41□□□□□ -0.1
PDX1P52945 TMEM198B-204ENST00000484016 896 ntBASIC14.41□□□□□ -0.1
PDX1P52945 AC106794.1-201ENST00000506935 792 ntBASIC14.41□□□□□ -0.1
PDX1P52945 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.41□□□□□ -0.1
PDX1P52945 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.41□□□□□ -0.1
PDX1P52945 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.41□□□□□ -0.1
PDX1P52945 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 AC128714.1-201ENST00000637035 887 ntBASIC14.41□□□□□ -0.1
PDX1P52945 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PDX1P52945 AC004923.1-202ENST00000642106 209 ntBASIC14.41□□□□□ -0.1
PDX1P52945 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PDX1P52945 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.41□□□□□ -0.1
PDX1P52945 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 CICP24-201ENST00000605464 2705 ntBASIC14.41□□□□□ -0.1
PDX1P52945 AL365209.1-201ENST00000624418 6473 ntBASIC14.41□□□□□ -0.1
PDX1P52945 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PDX1P52945 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PDX1P52945 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PDX1P52945 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 MROH4P-201ENST00000431302 1578 ntBASIC14.4□□□□□ -0.1
PDX1P52945 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.4□□□□□ -0.1
PDX1P52945 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.4□□□□□ -0.1
PDX1P52945 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PDX1P52945 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PDX1P52945 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.4□□□□□ -0.1
PDX1P52945 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.4□□□□□ -0.1
PDX1P52945 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.4□□□□□ -0.1
PDX1P52945 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.4□□□□□ -0.1
PDX1P52945 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.4□□□□□ -0.1
PDX1P52945 Z97180.1-201ENST00000445173 988 ntBASIC14.4□□□□□ -0.1
PDX1P52945 MPRIPP1-201ENST00000452433 1089 ntBASIC14.4□□□□□ -0.1
PDX1P52945 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.4□□□□□ -0.1
PDX1P52945 MARK2P5-201ENST00000507649 634 ntBASIC14.4□□□□□ -0.1
PDX1P52945 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.4□□□□□ -0.1
PDX1P52945 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.4□□□□□ -0.1
PDX1P52945 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.4□□□□□ -0.1
PDX1P52945 MIR3907-201ENST00000579424 151 ntBASIC14.4□□□□□ -0.1
PDX1P52945 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PDX1P52945 AL133499.1-201ENST00000596207 608 ntBASIC14.4□□□□□ -0.1
PDX1P52945 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.4□□□□□ -0.1
PDX1P52945 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
PDX1P52945 AC079336.7-201ENST00000623428 1078 ntBASIC14.4□□□□□ -0.1
PDX1P52945 AC100757.4-201ENST00000626934 759 ntBASIC14.4□□□□□ -0.1
PDX1P52945 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.4□□□□□ -0.1
PDX1P52945 AC068587.8-201ENST00000641239 219 ntBASIC14.4□□□□□ -0.1
PDX1P52945 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.4□□□□□ -0.1
PDX1P52945 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PDX1P52945 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PDX1P52945 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.4□□□□□ -0.1
PDX1P52945 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PDX1P52945 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.4□□□□□ -0.1
PDX1P52945 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDX1P52945 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
PDX1P52945 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PDX1P52945 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
PDX1P52945 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.39□□□□□ -0.11
PDX1P52945 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PDX1P52945 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PDX1P52945 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms