Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC34P49427 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC34P49427 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC34P49427 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 AC074338.1-201ENST00000416825 156 ntBASIC11.8□□□□□ -0.52
CDC34P49427 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC34P49427 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.8□□□□□ -0.52
CDC34P49427 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.8□□□□□ -0.52
CDC34P49427 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC34P49427 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC34P49427 AC243562.1-201ENST00000560672 389 ntBASIC11.8□□□□□ -0.52
CDC34P49427 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
CDC34P49427 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC34P49427 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
CDC34P49427 AL513190.1-201ENST00000621254 727 ntBASIC11.8□□□□□ -0.52
CDC34P49427 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC34P49427 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.8□□□□□ -0.52
CDC34P49427 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC34P49427 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 UXT-AS1-201ENST00000590504 1525 ntBASIC11.8□□□□□ -0.52
CDC34P49427 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC34P49427 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CDC34P49427 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC34P49427 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CDC34P49427 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC34P49427 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CDC34P49427 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 MIR497HG-202ENST00000572453 3838 ntBASIC11.79□□□□□ -0.52
CDC34P49427 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CDC34P49427 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.79□□□□□ -0.52
CDC34P49427 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 KRT18P2-201ENST00000447938 1258 ntBASIC11.79□□□□□ -0.52
CDC34P49427 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.79□□□□□ -0.52
CDC34P49427 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
CDC34P49427 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC34P49427 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CDC34P49427 AC091812.2-201ENST00000619081 385 ntBASIC11.79□□□□□ -0.52
CDC34P49427 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC34P49427 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CDC34P49427 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC34P49427 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.79□□□□□ -0.52
CDC34P49427 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC34P49427 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC34P49427 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC34P49427 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms