Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A3P43003 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A3P43003 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 MBLAC2-202ENST00000514906 1936 ntBASIC13.7□□□□□ -0.22
SLC1A3P43003 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A3P43003 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.69□□□□□ -0.22
SLC1A3P43003 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A3P43003 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 AC134312.5-201ENST00000568031 1313 ntBASIC13.69□□□□□ -0.22
SLC1A3P43003 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC1A3P43003 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SLC1A3P43003 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.69□□□□□ -0.22
SLC1A3P43003 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC1A3P43003 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SLC1A3P43003 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A3P43003 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.69□□□□□ -0.22
SLC1A3P43003 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.69□□□□□ -0.22
SLC1A3P43003 AC012441.1-201ENST00000446669 685 ntBASIC13.69□□□□□ -0.22
SLC1A3P43003 TPT1P11-201ENST00000458482 498 ntBASIC13.69□□□□□ -0.22
SLC1A3P43003 RN7SL752P-201ENST00000463779 287 ntBASIC13.69□□□□□ -0.22
SLC1A3P43003 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC1A3P43003 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A3P43003 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 AC010319.3-201ENST00000597028 470 ntBASIC13.69□□□□□ -0.22
SLC1A3P43003 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.69□□□□□ -0.22
SLC1A3P43003 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC1A3P43003 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A3P43003 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC1A3P43003 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SLC1A3P43003 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.69□□□□□ -0.22
SLC1A3P43003 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC1A3P43003 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A3P43003 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A3P43003 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A3P43003 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A3P43003 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.68□□□□□ -0.22
SLC1A3P43003 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 TLE1P1-201ENST00000422965 589 ntBASIC13.68□□□□□ -0.22
SLC1A3P43003 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A3P43003 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms