Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC20.28■□□□□ 0.84
CPS1P31327 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC20.28■□□□□ 0.84
CPS1P31327 AC095040.1-201ENST00000513286 675 ntBASIC20.28■□□□□ 0.84
CPS1P31327 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 AC087203.1-201ENST00000532111 1181 ntBASIC20.28■□□□□ 0.84
CPS1P31327 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC20.28■□□□□ 0.84
CPS1P31327 SNORD3B-1-201ENST00000577988 758 ntBASIC20.28■□□□□ 0.84
CPS1P31327 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC20.28■□□□□ 0.84
CPS1P31327 AC006986.1-201ENST00000612764 241 ntBASIC20.28■□□□□ 0.84
CPS1P31327 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC20.28■□□□□ 0.84
CPS1P31327 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.28■□□□□ 0.84
CPS1P31327 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC20.28■□□□□ 0.84
CPS1P31327 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CPS1P31327 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.28■□□□□ 0.84
CPS1P31327 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPS1P31327 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.28■□□□□ 0.84
CPS1P31327 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CPS1P31327 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 MIR611-201ENST00000384869 67 ntBASIC20.27■□□□□ 0.84
CPS1P31327 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 AL080243.1-201ENST00000423293 1060 ntBASIC20.27■□□□□ 0.84
CPS1P31327 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC20.27■□□□□ 0.84
CPS1P31327 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC20.27■□□□□ 0.84
CPS1P31327 MIR2278-201ENST00000516344 96 ntBASIC20.27■□□□□ 0.84
CPS1P31327 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 HNRNPA1P5-201ENST00000558213 966 ntBASIC20.27■□□□□ 0.84
CPS1P31327 AC120498.7-201ENST00000562876 330 ntBASIC20.27■□□□□ 0.84
CPS1P31327 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 PRMT1P1-201ENST00000604252 1009 ntBASIC20.27■□□□□ 0.84
CPS1P31327 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC20.27■□□□□ 0.84
CPS1P31327 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.27■□□□□ 0.84
CPS1P31327 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CPS1P31327 CICP23-201ENST00000605013 2741 ntBASIC20.27■□□□□ 0.84
CPS1P31327 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPS1P31327 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.27■□□□□ 0.83
CPS1P31327 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPS1P31327 AP000354.1-201ENST00000396982 456 ntBASIC20.27■□□□□ 0.83
CPS1P31327 MED15P3-201ENST00000413613 326 ntBASIC20.27■□□□□ 0.83
CPS1P31327 AC136604.1-202ENST00000425471 771 ntBASIC20.27■□□□□ 0.83
CPS1P31327 IFNWP2-201ENST00000431203 580 ntBASIC20.27■□□□□ 0.83
CPS1P31327 RN7SL128P-201ENST00000467883 305 ntBASIC20.27■□□□□ 0.83
CPS1P31327 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC20.27■□□□□ 0.83
CPS1P31327 LY6E-215ENST00000523847 427 ntTSL 3 BASIC20.27■□□□□ 0.83
CPS1P31327 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC20.27■□□□□ 0.83
CPS1P31327 AC006116.2-201ENST00000589958 988 ntBASIC20.27■□□□□ 0.83
CPS1P31327 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPS1P31327 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPS1P31327 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CPS1P31327 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.26■□□□□ 0.83
CPS1P31327 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPS1P31327 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CPS1P31327 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.26■□□□□ 0.83
CPS1P31327 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CPS1P31327 GGTLC4P-201ENST00000402176 664 ntBASIC20.26■□□□□ 0.83
CPS1P31327 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CPS1P31327 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC20.26■□□□□ 0.83
CPS1P31327 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPS1P31327 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC20.26■□□□□ 0.83
CPS1P31327 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC20.26■□□□□ 0.83
CPS1P31327 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC20.26■□□□□ 0.83
CPS1P31327 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC20.26■□□□□ 0.83
CPS1P31327 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC20.26■□□□□ 0.83
CPS1P31327 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC20.26■□□□□ 0.83
CPS1P31327 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC20.26■□□□□ 0.83
CPS1P31327 NT5C-204ENST00000578337 582 ntTSL 2 BASIC20.26■□□□□ 0.83
CPS1P31327 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPS1P31327 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC20.26■□□□□ 0.83
CPS1P31327 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC20.26■□□□□ 0.83
CPS1P31327 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.26■□□□□ 0.83
CPS1P31327 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CPS1P31327 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPS1P31327 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPS1P31327 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.25■□□□□ 0.83
CPS1P31327 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.25■□□□□ 0.83
CPS1P31327 AC006504.5-208ENST00000588784 2401 ntBASIC20.25■□□□□ 0.83
CPS1P31327 AC007950.2-201ENST00000615045 2347 ntBASIC20.25■□□□□ 0.83
CPS1P31327 BRD7P5-201ENST00000299197 1822 ntBASIC20.25■□□□□ 0.83
CPS1P31327 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPS1P31327 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPS1P31327 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPS1P31327 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC20.25■□□□□ 0.83
CPS1P31327 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPS1P31327 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CPS1P31327 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPS1P31327 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms