Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
PTPN6P29350 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PTPN6P29350 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 RN7SL832P-201ENST00000607781 1756 ntBASIC14.09□□□□□ -0.15
PTPN6P29350 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 KLF2P2-201ENST00000416807 1039 ntBASIC14.09□□□□□ -0.15
PTPN6P29350 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.09□□□□□ -0.15
PTPN6P29350 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.09□□□□□ -0.15
PTPN6P29350 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.09□□□□□ -0.15
PTPN6P29350 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.09□□□□□ -0.15
PTPN6P29350 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.09□□□□□ -0.15
PTPN6P29350 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.09□□□□□ -0.15
PTPN6P29350 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.09□□□□□ -0.15
PTPN6P29350 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.09□□□□□ -0.15
PTPN6P29350 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.09□□□□□ -0.15
PTPN6P29350 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.09□□□□□ -0.15
PTPN6P29350 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
PTPN6P29350 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.09□□□□□ -0.15
PTPN6P29350 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PTPN6P29350 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.09□□□□□ -0.15
PTPN6P29350 AC097376.2-205ENST00000610159 5334 ntBASIC14.09□□□□□ -0.15
PTPN6P29350 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PTPN6P29350 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTPN6P29350 AC089987.1-201ENST00000551654 2209 ntBASIC14.09□□□□□ -0.15
PTPN6P29350 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PTPN6P29350 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.08□□□□□ -0.15
PTPN6P29350 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PTPN6P29350 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PTPN6P29350 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PTPN6P29350 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.08□□□□□ -0.15
PTPN6P29350 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
PTPN6P29350 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.08□□□□□ -0.16
PTPN6P29350 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.08□□□□□ -0.16
PTPN6P29350 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.08□□□□□ -0.16
PTPN6P29350 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PTPN6P29350 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.08□□□□□ -0.16
PTPN6P29350 TLE1P1-201ENST00000422965 589 ntBASIC14.08□□□□□ -0.16
PTPN6P29350 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.08□□□□□ -0.16
PTPN6P29350 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 AC114812.1-204ENST00000449669 728 ntBASIC14.08□□□□□ -0.16
PTPN6P29350 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.08□□□□□ -0.16
PTPN6P29350 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.08□□□□□ -0.16
PTPN6P29350 AC004466.1-201ENST00000599515 1080 ntBASIC14.08□□□□□ -0.16
PTPN6P29350 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.08□□□□□ -0.16
PTPN6P29350 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 SALL4P5-201ENST00000419001 1760 ntBASIC14.08□□□□□ -0.16
PTPN6P29350 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PTPN6P29350 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PTPN6P29350 KRT8P24-201ENST00000560290 1559 ntBASIC14.08□□□□□ -0.16
PTPN6P29350 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.08□□□□□ -0.16
PTPN6P29350 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PTPN6P29350 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTPN6P29350 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.07□□□□□ -0.16
PTPN6P29350 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.07□□□□□ -0.16
PTPN6P29350 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
PTPN6P29350 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.07□□□□□ -0.16
PTPN6P29350 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PTPN6P29350 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms