Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.1□□□□□ -0.15
LAMA1P25391 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LAMA1P25391 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
LAMA1P25391 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.1□□□□□ -0.15
LAMA1P25391 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LAMA1P25391 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LAMA1P25391 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LAMA1P25391 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.1□□□□□ -0.15
LAMA1P25391 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LAMA1P25391 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.1□□□□□ -0.15
LAMA1P25391 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 AC083801.1-201ENST00000491689 358 ntBASIC14.1□□□□□ -0.15
LAMA1P25391 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.1□□□□□ -0.15
LAMA1P25391 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.1□□□□□ -0.15
LAMA1P25391 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LAMA1P25391 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LAMA1P25391 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LAMA1P25391 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LAMA1P25391 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LAMA1P25391 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LAMA1P25391 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LAMA1P25391 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LAMA1P25391 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 AL109954.1-202ENST00000564051 2148 ntBASIC14.1□□□□□ -0.15
LAMA1P25391 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.1□□□□□ -0.15
LAMA1P25391 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LAMA1P25391 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.09□□□□□ -0.15
LAMA1P25391 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.09□□□□□ -0.15
LAMA1P25391 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.09□□□□□ -0.15
LAMA1P25391 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.09□□□□□ -0.15
LAMA1P25391 TRMT112P3-201ENST00000580149 358 ntBASIC14.09□□□□□ -0.15
LAMA1P25391 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.09□□□□□ -0.15
LAMA1P25391 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.09□□□□□ -0.15
LAMA1P25391 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 KRT18P46-201ENST00000435568 1279 ntBASIC14.09□□□□□ -0.15
LAMA1P25391 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LAMA1P25391 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LAMA1P25391 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.09□□□□□ -0.15
LAMA1P25391 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.09□□□□□ -0.15
LAMA1P25391 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 AL512599.1-201ENST00000430724 685 ntBASIC14.09□□□□□ -0.15
LAMA1P25391 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 ERP29P1-201ENST00000442902 706 ntBASIC14.09□□□□□ -0.15
LAMA1P25391 RN7SL277P-201ENST00000481521 288 ntBASIC14.09□□□□□ -0.15
LAMA1P25391 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LAMA1P25391 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.09□□□□□ -0.15
LAMA1P25391 KRT8P1-201ENST00000557533 1207 ntBASIC14.09□□□□□ -0.15
LAMA1P25391 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.09□□□□□ -0.15
LAMA1P25391 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.09□□□□□ -0.15
LAMA1P25391 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.08□□□□□ -0.15
LAMA1P25391 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LAMA1P25391 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LAMA1P25391 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
LAMA1P25391 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LAMA1P25391 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMA1P25391 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.08□□□□□ -0.16
LAMA1P25391 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.08□□□□□ -0.16
LAMA1P25391 AC006372.4-201ENST00000624122 1543 ntBASIC14.08□□□□□ -0.16
LAMA1P25391 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LAMA1P25391 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LAMA1P25391 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.08□□□□□ -0.16
LAMA1P25391 AC092612.1-201ENST00000514501 998 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms