| TFE3 | P19532 | C9orf24-201 | ENST00000297623 | 1151 nt | APPRIS P1 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | PRAF2-201 | ENST00000376386 | 801 nt | TSL 2 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | GK-202 | ENST00000378941 | 458 nt | TSL 3 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | C9orf24-205 | ENST00000379133 | 712 nt | TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SHBG-202 | ENST00000380450 | 1271 nt | APPRIS P3 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | ATP5G2P4-201 | ENST00000442175 | 420 nt | BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | BNIP3P42-201 | ENST00000454982 | 569 nt | BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | MAATS1-203 | ENST00000463700 | 939 nt | TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | MFF-223 | ENST00000524634 | 647 nt | TSL 2 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | CFL1-212 | ENST00000531413 | 636 nt | TSL 3 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | PUDP-206 | ENST00000540122 | 825 nt | TSL 2 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | PPY2P-201 | ENST00000582808 | 702 nt | BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | PPY2P-202 | ENST00000583761 | 657 nt | TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC020911.1-201 | ENST00000591038 | 578 nt | TSL 2 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | BNIP3P29-201 | ENST00000598302 | 571 nt | BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC010735.2-201 | ENST00000607970 | 584 nt | TSL 4 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AL358472.3-201 | ENST00000608147 | 415 nt | BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC011447.5-201 | ENST00000616168 | 564 nt | BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC008687.7-202 | ENST00000637404 | 953 nt | BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC006504.5-208 | ENST00000588784 | 2401 nt | BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | ADORA1-201 | ENST00000309502 | 2896 nt | APPRIS P1 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | UNC13B-201 | ENST00000378495 | 6303 nt | APPRIS P3 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | CSTB-201 | ENST00000291568 | 2164 nt | APPRIS P1 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | ZPBP2-202 | ENST00000377940 | 2177 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | TCP10-210 | ENST00000617120 | 2182 nt | APPRIS ALT2 TSL 5 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | FAM8A1-201 | ENST00000259963 | 4677 nt | APPRIS P1 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | PDHX-201 | ENST00000227868 | 2389 nt | APPRIS P1 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | ATG4B-206 | ENST00000405546 | 3294 nt | TSL 2 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | FAM84A-201 | ENST00000295092 | 6355 nt | APPRIS P1 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SPATA16-201 | ENST00000351008 | 2106 nt | APPRIS P1 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | KCNJ2-202 | ENST00000535240 | 1685 nt | APPRIS P1 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | PMS1-221 | ENST00000624204 | 3417 nt | TSL 2 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SELENOS-201 | ENST00000398226 | 1439 nt | APPRIS P1 TSL 1 (best) BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | ATP11B-201 | ENST00000323116 | 7325 nt | APPRIS P1 TSL 2 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | CYB561A3-203 | ENST00000447532 | 1803 nt | TSL 5 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC092135.3-201 | ENST00000624151 | 1846 nt | BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | GPSM1-202 | ENST00000354753 | 3533 nt | APPRIS ALT2 TSL 5 BASIC | 15.5 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | RHD-202 | ENST00000342055 | 1557 nt | TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SLC22A15-202 | ENST00000369503 | 4720 nt | APPRIS P1 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | CPEB3-201 | ENST00000265997 | 4851 nt | APPRIS P3 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | TRMT1-201 | ENST00000221504 | 2179 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | ERN2-202 | ENST00000457008 | 3169 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC245052.4-201 | ENST00000452097 | 4158 nt | TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | TSFM-207 | ENST00000540550 | 1935 nt | TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SPATA7-203 | ENST00000393545 | 2123 nt | APPRIS P3 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | HOXC12-201 | ENST00000243103 | 3335 nt | APPRIS P1 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | MAGIX-208 | ENST00000616266 | 3295 nt | APPRIS ALT2 TSL 5 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SLC26A11-201 | ENST00000361193 | 2885 nt | APPRIS P1 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | THY1-206 | ENST00000528522 | 2050 nt | APPRIS P1 TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | PRSS8-201 | ENST00000317508 | 1872 nt | APPRIS P1 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | ASB10-204 | ENST00000420175 | 1694 nt | APPRIS P1 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SPDYE7P-201 | ENST00000355920 | 1064 nt | TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC011450.1-202 | ENST00000358234 | 573 nt | TSL 4 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | NAA10-201 | ENST00000370009 | 837 nt | TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | NAA10-203 | ENST00000370015 | 1002 nt | TSL 5 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | C9orf16-201 | ENST00000372994 | 713 nt | APPRIS P1 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | MTHFSD-202 | ENST00000381214 | 1210 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | STX1A-203 | ENST00000395155 | 783 nt | TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SPEG-202 | ENST00000396686 | 1086 nt | TSL 3 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | OLR1-203 | ENST00000432556 | 950 nt | TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | KRT223P-202 | ENST00000449164 | 1292 nt | BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SYNPR-202 | ENST00000450542 | 1004 nt | TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | POLR2F-208 | ENST00000470701 | 584 nt | TSL 3 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | TMEM14B-210 | ENST00000473276 | 730 nt | TSL 3 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | RNF216P1-213 | ENST00000494947 | 946 nt | TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC090502.1-202 | ENST00000515416 | 966 nt | TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | FLJ27354-203 | ENST00000526694 | 851 nt | TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC090099.4-201 | ENST00000527671 | 1027 nt | TSL 5 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AP001453.3-201 | ENST00000545800 | 853 nt | TSL 3 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC093525.1-201 | ENST00000569317 | 596 nt | APPRIS P1 TSL 3 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC110285.3-201 | ENST00000574472 | 665 nt | TSL 3 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | LINC00621-201 | ENST00000577004 | 1177 nt | TSL 4 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC011510.1-201 | ENST00000598541 | 286 nt | TSL 3 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | TMEM14B-220 | ENST00000612333 | 888 nt | TSL 3 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | IER3IP1-202 | ENST00000639845 | 832 nt | TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC002472.3-201 | ENST00000640124 | 621 nt | BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | GREM1-202 | ENST00000560830 | 2648 nt | TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | PLAT-205 | ENST00000519510 | 2030 nt | TSL 5 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | ANKMY1-210 | ENST00000406958 | 2396 nt | TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | MYLK3-201 | ENST00000394809 | 6911 nt | APPRIS P3 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | BARHL2-201 | ENST00000370445 | 1979 nt | APPRIS P1 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC026748.1-201 | ENST00000624349 | 3251 nt | BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC007388.1-204 | ENST00000449569 | 2517 nt | TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | PLAU-202 | ENST00000446342 | 2658 nt | APPRIS ALT2 TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | FGD5-AS1-202 | ENST00000424349 | 3792 nt | TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | ZBED8-202 | ENST00000523213 | 2484 nt | APPRIS P1 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | FAM180B-201 | ENST00000538490 | 1388 nt | APPRIS P1 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | LINC00639-201 | ENST00000553932 | 4496 nt | TSL 2 BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | CNOT10-201 | ENST00000328834 | 2815 nt | APPRIS P1 TSL 1 (best) BASIC | 15.49 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | TPGS2-202 | ENST00000383056 | 1726 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.48 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | INSC-208 | ENST00000530161 | 1702 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.48 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AL162231.1-201 | ENST00000421828 | 1525 nt | APPRIS P2 TSL 1 (best) BASIC | 15.48 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | OSBPL5-202 | ENST00000348039 | 2798 nt | TSL 2 BASIC | 15.48 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SHISA9-201 | ENST00000423335 | 4043 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.48 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | NRP2-203 | ENST00000357785 | 2926 nt | APPRIS P4 TSL 1 (best) BASIC | 15.48 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | PODN-202 | ENST00000371500 | 3287 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.48 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | AC099850.1-201 | ENST00000451775 | 1338 nt | TSL 2 BASIC | 15.48 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | MRPL37P1-201 | ENST00000592451 | 1337 nt | BASIC | 15.48 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | ENDOD1-201 | ENST00000278505 | 4687 nt | APPRIS P1 TSL 1 (best) BASIC | 15.48 | ■□□□□ 0.07 | | |
| TFE3 | P19532 | SLC8B1-202 | ENST00000546737 | 1656 nt | TSL 1 (best) BASIC | 15.48 | ■□□□□ 0.07 | | |