Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 AC092135.3-201ENST00000624151 1846 ntBASIC12.26□□□□□ -0.45
CCL3L1P16619 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CCL3L1P16619 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CCL3L1P16619 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 AC004945.1-201ENST00000416738 983 ntBASIC12.26□□□□□ -0.45
CCL3L1P16619 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 CSF2RBP1-201ENST00000447905 391 ntBASIC12.26□□□□□ -0.45
CCL3L1P16619 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.26□□□□□ -0.45
CCL3L1P16619 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 AC079316.1-201ENST00000548397 411 ntBASIC12.26□□□□□ -0.45
CCL3L1P16619 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.26□□□□□ -0.45
CCL3L1P16619 AC023310.1-201ENST00000554836 735 ntBASIC12.26□□□□□ -0.45
CCL3L1P16619 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.26□□□□□ -0.45
CCL3L1P16619 PPY2P-201ENST00000582808 702 ntBASIC12.26□□□□□ -0.45
CCL3L1P16619 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.26□□□□□ -0.45
CCL3L1P16619 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 AC002472.3-201ENST00000640124 621 ntBASIC12.26□□□□□ -0.45
CCL3L1P16619 AC113367.3-201ENST00000508316 1912 ntBASIC12.26□□□□□ -0.45
CCL3L1P16619 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CCL3L1P16619 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 AC097359.2-201ENST00000604992 2389 ntBASIC12.26□□□□□ -0.45
CCL3L1P16619 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CCL3L1P16619 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 AL354702.1-201ENST00000442006 1960 ntBASIC12.25□□□□□ -0.45
CCL3L1P16619 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL3L1P16619 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL3L1P16619 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.25□□□□□ -0.45
CCL3L1P16619 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL3L1P16619 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL3L1P16619 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL3L1P16619 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL3L1P16619 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.25□□□□□ -0.45
CCL3L1P16619 GCOM2-201ENST00000509133 1104 ntBASIC12.25□□□□□ -0.45
CCL3L1P16619 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL3L1P16619 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL3L1P16619 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL3L1P16619 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.25□□□□□ -0.45
CCL3L1P16619 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL3L1P16619 AC008687.7-202ENST00000637404 953 ntBASIC12.25□□□□□ -0.45
CCL3L1P16619 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL3L1P16619 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms