Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC25.05■■□□□ 1.6
TOP2AP11388 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC25.05■■□□□ 1.6
TOP2AP11388 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
TOP2AP11388 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TOP2AP11388 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TOP2AP11388 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC25.05■■□□□ 1.6
TOP2AP11388 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC25.05■■□□□ 1.6
TOP2AP11388 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TOP2AP11388 AL365181.1-201ENST00000564032 1828 ntBASIC25.05■■□□□ 1.6
TOP2AP11388 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TOP2AP11388 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TOP2AP11388 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC25.04■■□□□ 1.6
TOP2AP11388 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TOP2AP11388 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
TOP2AP11388 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
TOP2AP11388 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC25.04■■□□□ 1.6
TOP2AP11388 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TOP2AP11388 GOLGA8UP-201ENST00000527159 1755 ntBASIC25.04■■□□□ 1.6
TOP2AP11388 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC25.04■■□□□ 1.6
TOP2AP11388 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
TOP2AP11388 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
TOP2AP11388 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
TOP2AP11388 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TOP2AP11388 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
TOP2AP11388 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC25.04■■□□□ 1.6
TOP2AP11388 AL031673.1-201ENST00000611460 466 ntBASIC25.04■■□□□ 1.6
TOP2AP11388 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC25.04■■□□□ 1.6
TOP2AP11388 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC25.04■■□□□ 1.6
TOP2AP11388 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TOP2AP11388 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC25.04■■□□□ 1.6
TOP2AP11388 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC25.04■■□□□ 1.6
TOP2AP11388 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC25.04■■□□□ 1.6
TOP2AP11388 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
TOP2AP11388 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
TOP2AP11388 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TOP2AP11388 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
TOP2AP11388 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TOP2AP11388 AC232323.1-201ENST00000540724 2099 ntBASIC25.03■■□□□ 1.6
TOP2AP11388 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
TOP2AP11388 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
TOP2AP11388 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC25.03■■□□□ 1.6
TOP2AP11388 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC25.03■■□□□ 1.6
TOP2AP11388 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC25.03■■□□□ 1.6
TOP2AP11388 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC25.03■■□□□ 1.6
TOP2AP11388 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC25.03■■□□□ 1.6
TOP2AP11388 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC25.03■■□□□ 1.6
TOP2AP11388 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC25.03■■□□□ 1.6
TOP2AP11388 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC25.03■■□□□ 1.6
TOP2AP11388 AC092862.1-201ENST00000541534 533 ntBASIC25.03■■□□□ 1.6
TOP2AP11388 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC25.03■■□□□ 1.6
TOP2AP11388 AC006548.2-201ENST00000605217 529 ntBASIC25.03■■□□□ 1.6
TOP2AP11388 AL136982.5-201ENST00000605222 294 ntBASIC25.03■■□□□ 1.6
TOP2AP11388 AL009176.1-201ENST00000607876 650 ntBASIC25.03■■□□□ 1.6
TOP2AP11388 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 AC018529.2-202ENST00000611482 3087 ntBASIC25.03■■□□□ 1.6
TOP2AP11388 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC25.03■■□□□ 1.6
TOP2AP11388 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TOP2AP11388 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 AC103592.1-201ENST00000394513 664 ntBASIC25.02■■□□□ 1.6
TOP2AP11388 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC25.02■■□□□ 1.6
TOP2AP11388 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC25.02■■□□□ 1.6
TOP2AP11388 CISD2-202ENST00000503643 808 ntTSL 2 BASIC25.02■■□□□ 1.6
TOP2AP11388 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC25.02■■□□□ 1.6
TOP2AP11388 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC25.02■■□□□ 1.6
TOP2AP11388 APOC1-209ENST00000592885 562 ntTSL 3 BASIC25.02■■□□□ 1.6
TOP2AP11388 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC25.02■■□□□ 1.6
TOP2AP11388 RARS-210ENST00000626454 177 ntTSL 5 BASIC25.02■■□□□ 1.6
TOP2AP11388 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
TOP2AP11388 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC25.02■■□□□ 1.6
TOP2AP11388 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
TOP2AP11388 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC25.02■■□□□ 1.6
TOP2AP11388 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC25.02■■□□□ 1.6
TOP2AP11388 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TOP2AP11388 KRT18P4-201ENST00000422599 1288 ntBASIC25.02■■□□□ 1.6
TOP2AP11388 KRT18P62-201ENST00000446618 1287 ntBASIC25.02■■□□□ 1.6
TOP2AP11388 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC25.02■■□□□ 1.6
TOP2AP11388 AC008026.2-201ENST00000495438 348 ntBASIC25.02■■□□□ 1.6
TOP2AP11388 RN7SKP155-201ENST00000516031 288 ntBASIC25.02■■□□□ 1.6
TOP2AP11388 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC25.02■■□□□ 1.6
TOP2AP11388 AL139339.2-201ENST00000608063 657 ntBASIC25.02■■□□□ 1.6
TOP2AP11388 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms