Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
MT-ND1P03886 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.07□□□□□ -0.16
MT-ND1P03886 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.07□□□□□ -0.16
MT-ND1P03886 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 KRT18P13-201ENST00000400056 1290 ntBASIC14.07□□□□□ -0.16
MT-ND1P03886 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.07□□□□□ -0.16
MT-ND1P03886 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.07□□□□□ -0.16
MT-ND1P03886 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MT-ND1P03886 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.07□□□□□ -0.16
MT-ND1P03886 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.07□□□□□ -0.16
MT-ND1P03886 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.07□□□□□ -0.16
MT-ND1P03886 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 AC025678.2-201ENST00000562061 970 ntBASIC14.07□□□□□ -0.16
MT-ND1P03886 AC010336.2-201ENST00000564226 506 ntBASIC14.07□□□□□ -0.16
MT-ND1P03886 AC051619.7-201ENST00000568314 623 ntBASIC14.07□□□□□ -0.16
MT-ND1P03886 AC073592.8-201ENST00000624126 511 ntBASIC14.07□□□□□ -0.16
MT-ND1P03886 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.07□□□□□ -0.16
MT-ND1P03886 AC079781.4-201ENST00000641908 219 ntBASIC14.07□□□□□ -0.16
MT-ND1P03886 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MT-ND1P03886 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MT-ND1P03886 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MT-ND1P03886 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.07□□□□□ -0.16
MT-ND1P03886 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.07□□□□□ -0.16
MT-ND1P03886 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
MT-ND1P03886 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.06□□□□□ -0.16
MT-ND1P03886 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.06□□□□□ -0.16
MT-ND1P03886 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 AL139400.1-201ENST00000366220 510 ntBASIC14.06□□□□□ -0.16
MT-ND1P03886 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.06□□□□□ -0.16
MT-ND1P03886 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 AC125807.1-201ENST00000483097 614 ntBASIC14.06□□□□□ -0.16
MT-ND1P03886 SDHAP3-202ENST00000515467 728 ntBASIC14.06□□□□□ -0.16
MT-ND1P03886 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.06□□□□□ -0.16
MT-ND1P03886 AC069120.2-201ENST00000524091 540 ntBASIC14.06□□□□□ -0.16
MT-ND1P03886 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.06□□□□□ -0.16
MT-ND1P03886 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.06□□□□□ -0.16
MT-ND1P03886 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MT-ND1P03886 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
MT-ND1P03886 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 AC015911.4-201ENST00000588022 1070 ntBASIC14.06□□□□□ -0.16
MT-ND1P03886 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.06□□□□□ -0.16
MT-ND1P03886 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MT-ND1P03886 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MT-ND1P03886 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MT-ND1P03886 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MT-ND1P03886 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 AC023794.5-201ENST00000564380 2157 ntBASIC14.06□□□□□ -0.16
MT-ND1P03886 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MT-ND1P03886 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms